Gene EcDH1_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1538 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1668885 
End bp1671164 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content56% 
IMG OID 
Productconserved hypothetical protein 
Protein accessionACX39207 
Protein GI260448785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.163739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC CGTTAATTGT CGGCATCCGG CATCATAGTC CGGCCTGCGC CCGGCTGGTG 
AAATCGTTAA TCGAAAGCCA GCGGCCACGA TACGTGTTGA TTGAAGGCCC GGCTGATTTT
AATGACCGGG TAGACGAACT GTTTTTAGCC CACCAGCTTC CGGTAGCTAT TTACAGTTAT
TGCCAGTATC AGGACGGTGC AGCCCCCGGG CGTGGTGCCT GGACGCCATT TGCTGAATTT
TCGCCGGAGT GGCAGGCGCT ACAAGCCGCA CGTCGCATTC AGGCACAAAC TTACTTCATC
GATTTGCCTT GCTGGGCGCA GAGTGAAGAA GAGGACGATT CGCCTGATAC GCAAGATGAA
AGCCAGGCCT TACTGCTGCG TGCCACCCGC ATGGATAACA GCGATACCCT GTGGGATCAC
TTGTTCGAAG ATGAAAGCCA GCAAACTGCA TTACCCTCTG CGCTGGCGCA CTATTTTGCC
CAACTGCGGG GCGACGCCTC CGGCGATGCG CTCAATCGTC AGCGCGAAGC CTTTATGGCC
CGCTGGATTG GATGGGCGAT GCAGCAAAAT AATGGCGACG TGTTAGTTGT CTGCGGTGGC
TGGCACGCTC CGGCACTGGC AAAGATGTGG CGCGAATGCC CTCAGAAAAT TAACAAGCCA
GAATTGCCCT CGCTGGCAGA TGCCGTTACA GGTTGTTATC TCACACCCTA CAGTGAAAAG
CGCCTTGATG TGCTGGCAGG ATACCTTTCA GGAATGCCTG CCCCGGTATG GCAAAACTGG
TGCTGGCAGT GGGGCTTGCA GAAGGCCGGT GAACAACTGC TAAAAACTAT CCTTACCCGT
TTGCGCCAGC ACAAATTGCC CGCTTCTACC GCGGATATGG CTGCCGCTCA TCTGCATGCG
ATGGCGCTGG CACAGTTGCG CGGTCATACA CTACCGTTAC GCACTGACTG GCTGGATGCC
ATAGCAGGCT CGCTGATTAA AGAAGCCCTG AACGCGCCGT TGCCGTGGAG CTATCGCGGC
GTTATTCATC CCGATACCGA TCCGATTCTG CTAACGTTGA TAGACACATT AGCGGGTGAC
GGATTCGGTA AACTTGCCCC TTCTACGCCA CAACCGCCTC TGCCAAAAGA TGTCACCTGC
GAACTGGAAC GTACCGCAAT CTCCCTTCCG GCGGAGCTTA CCTTAAATCG CTTTACCCCC
GATGGGCTGG CGCAAAGTCA GGTGTTACAT CGGCTGGCAA TACTGGAGAT CCCTGGGATT
GTACGCCAGC AGGGAAGTAC ACTGACACTT GCAGGCAACG GTGAAGAACG CTGGAAATTA
ACCCGCCCGC TTAGCCAGCA TGCGGCATTG ATTGAGGCCG CCTGTTTTGG TGCCACACTC
CAGGAAGCCG CACGCAATAA ATTAGAAGCC GATATGCTGG ACGCGGGCGG AATCGGCAGT
ATCACCACAT GTCTTAGCCA GGCGGCGTTA GCGGGTCTGG CGTCCTTCAG TCAACAATTA
CTGGAGCAAC TCACACTATT AATCGCCCAG GAAAATCAAT TTGCCGAAAT GGGCCAGGCG
CTGGAAGTGC TTTATGCCTT ATGGCGGCTG GATGAAATTA GCGGTATGCA AGGCGCGCAG
ATATTACAAA CGACGTTATG CGCGACTATC GATCGCACGC TGTGGCTGTG TGAATCTAAC
GGCAGACCGG ATGAAAAGGA GTTTCACGCT CACCTGCATA GCTGGCAAGC GCTTTGCCAT
ATTCTGCGCG ATCTACATAG CGGCGTTAAT TTACCCGGCG TTTCTCTTTC TGCGGCGGTA
GCCTTACTGG AGCGACGCAG TCAGGCAATT CATGCCCCGG CGCTGGATCG CGGCGCGGCT
CTTGGCGCAC TAATGCGTCT GGAACATCCC AACGCCAGTG CCGAAGCGGC GCTGACGATG
CTGGCGCAGT TATCCCCGGC ACAATCTGGT GAGGCGCTGC ACGGTTTGCT GGCGCTGGCC
CGCCATCAAC TGGCCTGTCA GCCGGCATTT ATCGCCGGTT TCAGCAGTCA TTTAAATCAA
CTGAGTGAAG CCGATTTTAT TAACGCCCTG CCCGATTTAC GCGCGGCGAT GGCCTGGCTA
CCACCACGAG AACGCGGGAC GCTGGCGCAT CAGGTGCTTG AGCATTATCA ACTGGCGCAA
CTTCCCGTTT CGGCGCTGCA AATGCCGTTG CATTGTCCAC CACAGGCCAT TGCACATCAT
CAACAACTCG AACAGCAGGC ACTGGCATCG CTGCAAAACT GGGGAGTTTT CCATGTCTGA
 
Protein sequence
MSEPLIVGIR HHSPACARLV KSLIESQRPR YVLIEGPADF NDRVDELFLA HQLPVAIYSY 
CQYQDGAAPG RGAWTPFAEF SPEWQALQAA RRIQAQTYFI DLPCWAQSEE EDDSPDTQDE
SQALLLRATR MDNSDTLWDH LFEDESQQTA LPSALAHYFA QLRGDASGDA LNRQREAFMA
RWIGWAMQQN NGDVLVVCGG WHAPALAKMW RECPQKINKP ELPSLADAVT GCYLTPYSEK
RLDVLAGYLS GMPAPVWQNW CWQWGLQKAG EQLLKTILTR LRQHKLPAST ADMAAAHLHA
MALAQLRGHT LPLRTDWLDA IAGSLIKEAL NAPLPWSYRG VIHPDTDPIL LTLIDTLAGD
GFGKLAPSTP QPPLPKDVTC ELERTAISLP AELTLNRFTP DGLAQSQVLH RLAILEIPGI
VRQQGSTLTL AGNGEERWKL TRPLSQHAAL IEAACFGATL QEAARNKLEA DMLDAGGIGS
ITTCLSQAAL AGLASFSQQL LEQLTLLIAQ ENQFAEMGQA LEVLYALWRL DEISGMQGAQ
ILQTTLCATI DRTLWLCESN GRPDEKEFHA HLHSWQALCH ILRDLHSGVN LPGVSLSAAV
ALLERRSQAI HAPALDRGAA LGALMRLEHP NASAEAALTM LAQLSPAQSG EALHGLLALA
RHQLACQPAF IAGFSSHLNQ LSEADFINAL PDLRAAMAWL PPRERGTLAH QVLEHYQLAQ
LPVSALQMPL HCPPQAIAHH QQLEQQALAS LQNWGVFHV