Gene EcDH1_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1389 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1494447 
End bp1495382 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content51% 
IMG OID 
Productribonuclease BN 
Protein accessionACX39061 
Protein GI260448639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.471365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACGTG ATGAACTCAT GGAATTAATT TTTTTAGGTA CTTCAGCCGG TGTGCCAACC 
CGCACGCGCA ATGTCACGGC AATATTGCTT AACCTGCAAC ATCCGACCCA GAGCGGACTT
TGGTTGTTTG ACTGCGGTGA AGGCACCCAG CATCAGCTAC TGCATACCGC CTTTAACCCT
GGAAAACTGG ACAAGATTTT TATCAGTCAC CTTCATGGCG ATCATCTTTT TGGTTTACCC
GGCTTGCTGT GCAGTCGTTC TATGTCAGGC ATTATCCAAC CCTTAACGAT TTATGGTCCG
CAAGGTATCC GTGAATTTGT GGAAACCGCG CTGCGGATTA GCGGCTCATG GACCGATTAT
CCGCTGGAAA TTGTCGAAAT TGGCGCTGGC GAAATTCTCG ATGATGGCCT GCGCAAAGTA
ACCGCTTATC CGCTGGAACA CCCACTGGAA TGTTATGGCT ATCGTATTGA AGAACATGAT
AAACCGGGTG CATTAAATGC CCAGGCATTA AAAGCTGCTG GCGTGCCGCC TGGCCCACTG
TTTCAGGAAT TAAAAGCGGG CAAAACAATC ACGCTGGAAG ATGGAAGGCA GATTAACGGC
GCAGATTACT TAGCTGCTCC AGTGCCAGGT AAAGCGCTCG CTATTTTCGG CGATACCGGC
CCCTGCGATG CCGCACTTGA CCTGGCTAAA GGTGTCGATG TCATGGTGCA CGAAGCGACG
CTGGATATAA CCATGGAAGC CAAAGCCAAT AGTCGCGGCC ATAGCTCTAC ACGCCAGGCT
GCGACACTAG CCCGTGAGGC TGGAGTCGGC AAGCTAATCA TTACCCACGT CAGCTCGCGC
TATGATGACA AAGGTTGTCA GCACCTGTTA CGTGAATGCA GGTCAATTTT CCCGGCGACT
GAACTGGCGA ATGATTTCAC CGTGTTTAAC GTTTAA
 
Protein sequence
MKRDELMELI FLGTSAGVPT RTRNVTAILL NLQHPTQSGL WLFDCGEGTQ HQLLHTAFNP 
GKLDKIFISH LHGDHLFGLP GLLCSRSMSG IIQPLTIYGP QGIREFVETA LRISGSWTDY
PLEIVEIGAG EILDDGLRKV TAYPLEHPLE CYGYRIEEHD KPGALNAQAL KAAGVPPGPL
FQELKAGKTI TLEDGRQING ADYLAAPVPG KALAIFGDTG PCDAALDLAK GVDVMVHEAT
LDITMEAKAN SRGHSSTRQA ATLAREAGVG KLIITHVSSR YDDKGCQHLL RECRSIFPAT
ELANDFTVFN V