Gene EcDH1_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1339 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1442231 
End bp1442890 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content49% 
IMG OID 
ProductSNARE associated Golgi protein-like protein 
Protein accessionACX39011 
Protein GI260448589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.217693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTGA TTTATTTCCT CATCGATTTT ATCCTGCACA TTGACGTGCA TCTGGCAGAG 
CTGGTCGCGG AGTACGGCGT CTGGGTTTAT GCCATTTTGT TCTTAATTTT GTTCTGTGAA
ACCGGTCTGG TGGTAACGCC GTTTTTACCG GGTGATTCAT TGCTGTTTGT TGCCGGAGCG
TTGGCATCAC TGGAAACCAA CGATCTCAAC GTCCATATGA TGGTGGTGCT GATGCTGATC
GCCGCGATTG TGGGTGACGC GGTCAATTAC ACTATCGGGC GGTTGTTCGG TGAAAAGTTG
TTCAGTAATC CCAATTCGAA AATTTTCCGT CGCAGTTATC TCGACAAAAC CCATCAGTTT
TATGAGAAAC ATGGCGGCAA AACGATTATT CTCGCCCGTT TTGTGCCGAT CGTCAGAACG
TTCGCCCCGT TTGTTGCGGG AATGGGCCAC ATGTCGTACC GTCATTTCGC CGCTTATAAC
GTGATCGGCG CACTGTTGTG GGTACTGCTT TTTACCTACG CAGGCTATTT CTTCGGTACA
ATCCCGATGG TTCAGGATAA CCTTAAGCTG CTGATCGTCG GGATTATTGT GGTTTCTATT
TTGCCGGGCG TCATCGAAAT AATCCGTCAC AAACGCGCTG CGGCACGCGC CGCAAAATAA
 
Protein sequence
MDLIYFLIDF ILHIDVHLAE LVAEYGVWVY AILFLILFCE TGLVVTPFLP GDSLLFVAGA 
LASLETNDLN VHMMVVLMLI AAIVGDAVNY TIGRLFGEKL FSNPNSKIFR RSYLDKTHQF
YEKHGGKTII LARFVPIVRT FAPFVAGMGH MSYRHFAAYN VIGALLWVLL FTYAGYFFGT
IPMVQDNLKL LIVGIIVVSI LPGVIEIIRH KRAAARAAK