Gene EcDH1_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1291 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1396442 
End bp1397770 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content51% 
IMG OID 
ProductD-serine ammonia-lyase 
Protein accessionACX38965 
Protein GI260448543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACG CTAAAATGAA CTCGCTCATC GCCCAGTATC CGTTGGTAAA GGATCTGGTT 
GCTCTTAAAG AAACCACCTG GTTTAATCCT GGCACGACCT CATTGGCTGA AGGTTTACCT
TATGTTGGCC TGACCGAACA GGATGTTCAG GACGCCCATG CGCGCTTATC CCGTTTTGCA
CCCTATCTGG CAAAAGCATT TCCTGAAACT GCTGCCACTG GGGGGATTAT TGAATCAGAA
CTGGTTGCCA TTCCAGCTAT GCAAAAACGG CTGGAAAAAG AATATCAGCA ACCGATCAGC
GGGCAACTGT TACTGAAAAA AGATAGCCAT TTGCCCATTT CCGGCTCCAT AAAAGCACGC
GGCGGGATTT ATGAAGTCCT GGCACACGCA GAAAAACTGG CTCTGGAAGC GGGGTTGCTG
ACGCTTGATG ATGACTACAG CAAACTGCTT TCTCCGGAGT TTAAACAGTT CTTTAGCCAA
TACAGCATTG CTGTGGGCTC AACCGGAAAT CTGGGGTTAT CAATCGGCAT TATGAGCGCC
CGCATTGGCT TTAAGGTGAC AGTTCATATG TCTGCTGATG CCCGGGCATG GAAAAAAGCG
AAACTGCGCA GCCATGGCGT TACGGTCGTG GAATATGAGC AAGATTATGG TGTTGCCGTC
GAGGAAGGAC GTAAAGCAGC GCAGTCTGAC CCGAACTGTT TCTTTATTGA TGACGAAAAT
TCCCGCACGT TGTTCCTTGG GTATTCCGTC GCTGGCCAGC GTCTTAAAGC GCAATTTGCC
CAGCAAGGCC GTATCGTCGA TGCTGATAAC CCTCTGTTTG TCTATCTGCC GTGTGGTGTT
GGCGGTGGTC CTGGTGGCGT CGCATTCGGG CTTAAACTGG CGTTTGGCGA TCATGTTCAC
TGCTTTTTTG CCGAACCAAC GCACTCCCCT TGTATGTTGT TAGGCGTCCA TACAGGATTA
CACGATCAGA TTTCTGTTCA GGATATTGGT ATCGACAACC TTACCGCAGC GGATGGCCTT
GCAGTTGGTC GCGCATCAGG CTTTGTCGGG CGGGCAATGG AGCGTCTGCT GGATGGCTTC
TATACCCTTA GCGATCAAAC CATGTATGAC ATGCTTGGCT GGCTGGCGCA GGAAGAAGGT
ATTCGTCTTG AACCTTCGGC ACTGGCGGGT ATGGCCGGAC CTCAGCGCGT GTGTGCATCA
GTAAGTTACC AACAGATGCA CGGTTTCAGC GCAGAACAAC TGCGTAATAC CACTCATCTG
GTGTGGGCGA CGGGAGGTGG AATGGTGCCG GAAGAAGAGA TGAATCAATA TCTGGCAAAA
GGCCGTTAA
 
Protein sequence
MENAKMNSLI AQYPLVKDLV ALKETTWFNP GTTSLAEGLP YVGLTEQDVQ DAHARLSRFA 
PYLAKAFPET AATGGIIESE LVAIPAMQKR LEKEYQQPIS GQLLLKKDSH LPISGSIKAR
GGIYEVLAHA EKLALEAGLL TLDDDYSKLL SPEFKQFFSQ YSIAVGSTGN LGLSIGIMSA
RIGFKVTVHM SADARAWKKA KLRSHGVTVV EYEQDYGVAV EEGRKAAQSD PNCFFIDDEN
SRTLFLGYSV AGQRLKAQFA QQGRIVDADN PLFVYLPCGV GGGPGGVAFG LKLAFGDHVH
CFFAEPTHSP CMLLGVHTGL HDQISVQDIG IDNLTAADGL AVGRASGFVG RAMERLLDGF
YTLSDQTMYD MLGWLAQEEG IRLEPSALAG MAGPQRVCAS VSYQQMHGFS AEQLRNTTHL
VWATGGGMVP EEEMNQYLAK GR