Gene EcDH1_1178 details

Gene Information

• Locus tag: EcDH1_1178
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 1269850
• End bp: 1271862
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 53%
• Product: transcriptional regulator, NifA subfamily, Fis Family
• Protein accession: ACX38852
• Protein GI: 260448430

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATGT CAGACGAGGC GATGTTTGCC CCGCCACAAG GAATAACAAT TGAAGCGGTA 
AACGGAATGC TCGCGGAGCG GTTAGCACAG AAACACGGCA AGGCGTCTTT ATTACGCGCC 
TTCATCCCGC TGCCGCCGCC GTTCAGCCCG GTACAACTTA TTGAACTGCA TGTTCTCAAA 
AGCAACTTCT ATTACCGCTA CCATGATGAT GGCAGCGATG TGACGGCAAC AACAGAGTAT 
CAGGGCGAGA TGGTCGATTA TTCGCGTCAC GCCGTCCTTC TCGGCAGTAG TGGAATGGCG 
GAGCTACGCT TTATTCGCAC CCACGGCAGT CGTTTTACTT CCCAGGATTG CACACTGTTT 
AACTGGCTGG CGCGGATAAT CACCCCGGTT CTGCAATCAT GGCTCAATGA TGAAGAACAG 
CAGGTGGCGC TGCGTTTGCT GGAGAAAGAT CGCGATCATC ATCGGGTACT GGTTGATATT 
ACTAATGCAG TGCTGTCACA TCTTGATCTC GACGATCTGA TCGCTGACGT CGCTCGTGAG 
ATCCATCATT TTTTCGGTCT GGCTTCAGTC AGTATGGTAC TGGGCGATCA TCGAAAGAAC 
GAGAAGTTCA GCCTGTGGTG CAGCGATCTT TCTGCCTCAC ATTGTGCGTG TCTGCCACGC 
TGTATGCCTG GCGAAAGTGT ATTGCTGACA CAAACGCTAC AAACCCGACA ACCGACCTTG 
ACGCACCGTG CAGATGATCT GTTTCTCTGG CAACGCGACC CGTTATTACT CTTACTTGCA 
TCTAACGGCT GCGAATCTGC GCTCCTTATA CCGCTTACCT TTGGCAACCA TACACCGGGT 
GCATTGTTGC TGGCGCATAC CTCTTCCACT CTCTTTAGTG AGGAAAACTG CCAGCTACTA 
CAACACATAG CCGATCGCAT CGCTATTGCC GTTGGCAATG CCGATGCCTG GCGTAGCATG 
ACCGATTTGC AGGAAAGTTT GCAGCAAGAA AACCACCAGC TTAGCGAGCA GCTCCTTTCG 
AATCTGGGCA TCGGTGACAT TATCTATCAA AGCCAGGCAA TGGAAGACCT GCTCCAGCAG 
GTAGATATTG TGGCGAAGAG CGACAGTACG GTGTTGATTT GTGGTGAAAC CGGAACTGGC 
AAAGAGGTGA TCGCCAGAGC GATCCATCAA CTTAGCCCGC GACGCGACAA GCCGCTGGTC 
AAAATCAACT GCGCTGCCAT CCCCGCCAGT CTTCTGGAAA GTGAGTTATT CGGTCATGAC 
AAAGGGGCGT TTACTGGTGC GATTAATACC CATCGTGGTC GTTTTGAAAT TGCCGATGGC 
GGCACGTTGT TTCTCGATGA AATTGGCGAT CTGCCGTTAG AACTTCAGCC TAAACTGCTG 
CGCGTATTGC AGGAGCGGGA GATTGAGCGT CTCGGCGGGA GTAGAACGAT CCCGGTGAAT 
GTCAGAGTCA TTGCCGCCAC CAACCGTGAT TTGTGGCAAA TGGTTGAAGA TCGCCAGTTT 
CGCAGCGATC TCTTTTATCG CCTGAATGTC TTCCCACTGG AATTGCCGCC GCTACGCGAC 
CGTCCGGAAG ATATCCCTCT TTTAGCAAAA CATTTCACGC AAAAAATGGC GCGCCATATG 
AATCGCGCAA TTGACGCCAT CCCGACCGAG GCACTACGCC AGTTGATGTC GTGGGATTGG 
CCGGGCAACG TGCGCGAGCT GGAAAACGTG ATTGAGCGGG CGGTACTGTT GACTCGTGGT 
AACAGTCTGA ATTTACATCT AAATGTCCGA CAAAGCCGTT TACTGCCGAC GCTAAATGAA 
GATTCAGCGC TTCGCAGTTC AATGGCGCAG TTACTGCACC CGACGACGCC AGAGAATGAC 
GAAGAAGAAC GTCAGCGCAT TGTTCAGGTA TTGCGAGAAA CCAATGGCAT TGTTGCCGGG 
CCCCGTGGCG CAGCGACGCG ATTAGGGATG AAGCGCACCA CGCTGCTGTC ACGAATGCAG 
CGGCTGGGGA TCTCGGTTCG CGAGGTGTTG TAA 

 

Protein sequence

MAMSDEAMFA PPQGITIEAV NGMLAERLAQ KHGKASLLRA FIPLPPPFSP VQLIELHVLK 
SNFYYRYHDD GSDVTATTEY QGEMVDYSRH AVLLGSSGMA ELRFIRTHGS RFTSQDCTLF 
NWLARIITPV LQSWLNDEEQ QVALRLLEKD RDHHRVLVDI TNAVLSHLDL DDLIADVARE 
IHHFFGLASV SMVLGDHRKN EKFSLWCSDL SASHCACLPR CMPGESVLLT QTLQTRQPTL 
THRADDLFLW QRDPLLLLLA SNGCESALLI PLTFGNHTPG ALLLAHTSST LFSEENCQLL 
QHIADRIAIA VGNADAWRSM TDLQESLQQE NHQLSEQLLS NLGIGDIIYQ SQAMEDLLQQ 
VDIVAKSDST VLICGETGTG KEVIARAIHQ LSPRRDKPLV KINCAAIPAS LLESELFGHD 
KGAFTGAINT HRGRFEIADG GTLFLDEIGD LPLELQPKLL RVLQEREIER LGGSRTIPVN 
VRVIAATNRD LWQMVEDRQF RSDLFYRLNV FPLELPPLRD RPEDIPLLAK HFTQKMARHM 
NRAIDAIPTE ALRQLMSWDW PGNVRELENV IERAVLLTRG NSLNLHLNVR QSRLLPTLNE 
DSALRSSMAQ LLHPTTPEND EEERQRIVQV LRETNGIVAG PRGAATRLGM KRTTLLSRMQ 
RLGISVREVL