Gene EcDH1_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0984 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1055247 
End bp1056026 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content53% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionACX38667 
Protein GI260448245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0916994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGG TTGCCGTTGT CATCGGTGGT GGGCAAACCT TAGGCGCGTT CCTGTGCCAC 
GGTCTGGCTG CCGAGGGGTA TCGCGTCGCG GTTGTCGATA TTCAGAGCGA CAAAGCCGCA
AATGTGGCAC AAGAAATTAA CGCCGAATAT GGTGAAAGTA TGGCGTACGG TTTTGGTGCT
GACGCCACTA GCGAGCAAAG CGTTCTGGCG CTCTCTCGTG GGGTAGATGA AATCTTTGGT
CGCGTGGATT TGCTGGTCTA CAGCGCCGGA ATAGCAAAAG CAGCCTTTAT CAGCGACTTC
CAGCTCGGCG ATTTTGACCG TTCGCTACAG GTGAATCTGG TGGGTTATTT CCTGTGTGCG
CGTGAATTTT CGCGTTTGAT GATCCGCGAC GGGATTCAGG GGCGCATTAT TCAGATCAAC
TCGAAATCCG GCAAAGTGGG CAGCAAACAC AACTCTGGCT ACAGCGCAGC GAAATTTGGT
GGCGTCGGGC TGACTCAATC ACTGGCGCTG GATCTGGCGG AGTACGGCAT TACGGTGCAT
TCACTGATGC TCGGTAACCT GCTGAAATCG CCGATGTTCC AGTCACTGTT GCCACAATAC
GCGACCAAGC TGGGTATCAA ACCGGATCAA GTCGAGCAGT ATTACATCGA CAAAGTACCG
CTCAAACGCG GCTGCGATTA TCAAGATGTG CTGAATATGC TGCTGTTCTA CGCCAGTCCT
AAGGCGTCGT ACTGCACCGG ACAGTCGATC AATGTCACCG GCGGTCAGGT GATGTTCTGA
 
Protein sequence
MNQVAVVIGG GQTLGAFLCH GLAAEGYRVA VVDIQSDKAA NVAQEINAEY GESMAYGFGA 
DATSEQSVLA LSRGVDEIFG RVDLLVYSAG IAKAAFISDF QLGDFDRSLQ VNLVGYFLCA
REFSRLMIRD GIQGRIIQIN SKSGKVGSKH NSGYSAAKFG GVGLTQSLAL DLAEYGITVH
SLMLGNLLKS PMFQSLLPQY ATKLGIKPDQ VEQYYIDKVP LKRGCDYQDV LNMLLFYASP
KASYCTGQSI NVTGGQVMF