Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0927 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 996544 |
End bp | 999210 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | CRISPR-associated helicase Cas3 |
Protein accession | ACX38610 |
Protein GI | 260448188 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.732097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACCTT TTAAATATAT ATGCCATTAC TGGGGAAAAT CCTCAAAAAG CTTGACGAAA GGAAATGATA TTCATCTGTT AATTTATCAT TGCCTTGATG TTGCTGCTGT TGCAGATTGC TGGTGGGATC AATCAGTCGT ACTGCAAAAT ACTTTTTGCC GAAATGAAAT GCTATCAAAA CAGAGGGTGA AGGCCTGGCT GTTATTTTTC ATTGCTCTTC ATGATATTGG AAAGTTTGAT ATACGATTCC AATATAAATC AGCAGAAAGT TGGCTGAAAT TAAATCCTGC AACGCCATCA CTTAATGGTC CATCAACACA AATGTGCCGT AAATTTAATC ATGGTGCAGC CGGTCTGTAT TGGTTTAACC AGGATTCACT TTCAGAGCAA TCTCTCGGGG ATTTTTTCAG TTTTTTTGAT GCCGCTCCTC ATCCTTATGA GTCCTGGTTT CCATGGGTAG AGGCCGTTAC AGGACATCAT GGTTTTATAT TACATTCCCA GGATCAAGAT AAGTCGCGTT GGGAAATGCC AGCTTCTCTG GCATCTTATG CTGCGCAAGA TAAACAGGCT CGTGAGGAGT GGATATCTGT ACTGGAAGCA TTATTTTTAA CGCCAGCGGG GTTATCTATA AACGATATAC CACCTGATTG TTCATCACTG TTAGCAGGTT TTTGCTCGCT TGCTGACTGG TTAGGCTCCT GGACTACAAC GAATACCTTT CTGTTTAATG AGGATGCGCC TTCCGACATA AATGCTCTGA GAACGTATTT CCAGGACCGA CAGCAGGATG CGAGCCGGGT ATTGGAGTTG AGTGGACTTG TATCAAATAA GCGATGTTAT GAAGGTGTTC ATGCACTACT GGACAATGGC TATCAACCCA GACAATTACA GGTGTTAGTT GATGCTCTTC CAGTAGCTCC CGGGCTGACG GTAATAGAGG CACCTACAGG CTCCGGTAAA ACGGAAACAG CGCTGGCCTA TGCTTGGAAA CTTATTGATC AACAAATTGC GGATAGTGTT ATTTTTGCCC TCCCAACACA AGCTACCGCG AATGCTATGC TTACGAGAAT GGAAGCGAGC GCGAGCCACT TATTTTCATC CCCAAATCTT ATTCTTGCTC ATGGCAATTC ACGGTTTAAC CACCTCTTTC AATCAATAAA ATCACGCGCG ATTACTGAAC AGGGGCAAGA AGAAGCGTGG GTTCAGTGTT GTCAGTGGTT GTCACAAAGC AATAAGAAAG TGTTTCTTGG GCAAATCGGC GTTTGCACGA TTGATCAGGT GTTGATATCG GTATTGCCAG TTAAACACCG CTTTATCCGT GGTTTGGGAA TTGGTCGAAG TGTTTTAATT GTTGATGAAG TTCATGCTTA CGACACCTAT ATGAACGGCT TGCTGGAGGC AGTGCTCAAG GCTCAGGCTG ATGTGGGAGG GAGTGTTATT CTTCTTTCCG CAACCCTACC AATGAAACAA AAACAGAAAC TTCTGGATAC TTATGGTCTG CATACAGATC CAGTGGAAAA TAACTCCGCA TATCCACTCA TTAACTGGCG AGGTGTGAAT GGTGCGCAAC GTTTTGATCT GCTAGCTCAT CCAGAACAAC TCCCGCCCCG CTTTTCGATT CAGCCAGAAC CTATTTGTTT AGCTGACATG TTACCTGACC TTACGATGTT AGAGCGAATG ATCGCAGCGG CAAACGCGGG TGCACAGGTC TGTCTTATTT GCAATTTGGT TGACGTTGCA CAAGTATGCT ACCAACGGCT AAAGGAGCTA AATAACACGC AAGTAGATAT AGATTTGTTT CATGCGCGCT TTACGCTGAA CGATCGTCGT GAAAAAGAGA ATCGAGTTAT TAGCAATTTC GGCAAAAATG GGAAGCGAAA TGTTGGACGG ATACTTGTCG CAACCCAGGT CGTGGAACAA TCACTCGACG TTGATTTTGA TTGGTTAATT ACTCAGCATT GTCCTGCAGA TTTGCTTTTC CAACGATTGG GCCGTTTACA TCGCCATCAT CGCAAATATC GTCCCGCTGG TTTTGAGATT CCTGTTGCCA CCATTTTGCT GCCTGATGGC GAGGGTTACG GACGACATGA GCATATTTAT AGCAACGTTA GAGTCATGTG GCGGACGCAG CAACATATTG AGGAGCTTAA TGGAGCATCC TTATTTTTCC CTGATGCTTA CCGGCAATGG CTGGATAGCA TTTACGATGA TGCGGAAATG GATGAGCCAG AATGGGTCGG CAATGGCATG GATAAATTTG AAAGCGCCGA GTGTGAAAAA AGGTTCAAGG CTCGCAAGGT CCTGCAGTGG GCTGAAGAAT ATAGCTTGCA GGATAACGAT GAAACCATTC TTGCGGTAAC GAGGGATGGG GAAATGAGCC TGCCATTATT GCCTTATGTA CAAACGTCTT CAGGTAAACA ACTGCTCGAT GGCCAGGTCT ACGAGGACCT AAGTCATGAA CAGCAGTATG AGGCGCTTGC ACTTAATCGC GTCAATGTAC CCTTCACCTG GAAACGTAGT TTTTCTGAAG TAGTAGATGA AGATGGGTTA CTTTGGCTGG AAGGGAAACA GAATCTGGAT GGATGGGTCT GGCAGGGTAA CAGTATTGTT ATTACCTATA CAGGGGATGA AGGGATGACC AGAGTCATCC CTGCAAATCC CAAATAA
|
Protein sequence | MEPFKYICHY WGKSSKSLTK GNDIHLLIYH CLDVAAVADC WWDQSVVLQN TFCRNEMLSK QRVKAWLLFF IALHDIGKFD IRFQYKSAES WLKLNPATPS LNGPSTQMCR KFNHGAAGLY WFNQDSLSEQ SLGDFFSFFD AAPHPYESWF PWVEAVTGHH GFILHSQDQD KSRWEMPASL ASYAAQDKQA REEWISVLEA LFLTPAGLSI NDIPPDCSSL LAGFCSLADW LGSWTTTNTF LFNEDAPSDI NALRTYFQDR QQDASRVLEL SGLVSNKRCY EGVHALLDNG YQPRQLQVLV DALPVAPGLT VIEAPTGSGK TETALAYAWK LIDQQIADSV IFALPTQATA NAMLTRMEAS ASHLFSSPNL ILAHGNSRFN HLFQSIKSRA ITEQGQEEAW VQCCQWLSQS NKKVFLGQIG VCTIDQVLIS VLPVKHRFIR GLGIGRSVLI VDEVHAYDTY MNGLLEAVLK AQADVGGSVI LLSATLPMKQ KQKLLDTYGL HTDPVENNSA YPLINWRGVN GAQRFDLLAH PEQLPPRFSI QPEPICLADM LPDLTMLERM IAAANAGAQV CLICNLVDVA QVCYQRLKEL NNTQVDIDLF HARFTLNDRR EKENRVISNF GKNGKRNVGR ILVATQVVEQ SLDVDFDWLI TQHCPADLLF QRLGRLHRHH RKYRPAGFEI PVATILLPDG EGYGRHEHIY SNVRVMWRTQ QHIEELNGAS LFFPDAYRQW LDSIYDDAEM DEPEWVGNGM DKFESAECEK RFKARKVLQW AEEYSLQDND ETILAVTRDG EMSLPLLPYV QTSSGKQLLD GQVYEDLSHE QQYEALALNR VNVPFTWKRS FSEVVDEDGL LWLEGKQNLD GWVWQGNSIV ITYTGDEGMT RVIPANPK
|
| |