Gene EcDH1_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0904 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp970112 
End bp972346 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content54% 
IMG OID 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionACX38587 
Protein GI260448165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000660798 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCGG TAAGAAGTGC ACATATCAAT AAGGCTGGTG AATTTGATCC GGAAAAATGG 
ATCGCAAGTC TGGGTATTAC CAGCCAGAAG TCGTGTGAGT GCTTAGCCGA AACCTGGGCG
TATTGTCTGC AACAGACGCA GGGGCATCCG GATGCCAGTC TGTTATTGTG GCGTGGTGTT
GAGATGGTGG AGATCCTCTC GACATTAAGT ATGGACATTG ACACGCTGCG GGCGGCGCTG
CTTTTCCCTC TGGCGGATGC CAACGTAGTC AGCGAAGATG TGCTGCGTGA GAGCGTCGGT
AAGTCGGTCG TTAACCTTAT TCACGGCGTG CGTGATATGG CGGCGATCCG CCAGCTGAAA
GCGACGCACA CTGATTCTGT TTCCTCCGAA CAGGTCGATA ACGTTCGCCG GATGTTATTG
GCGATGGTCG ATGATTTTCG CTGCGTAGTC ATCAAACTGG CGGAGCGTAT TGCTCATCTG
CGCGAAGTAA AAGATGCGCC GGAAGATGAA CGTGTACTGG CGGCAAAAGA GTGTACCAAC
ATCTACGCAC CGCTGGCTAA CCGTCTCGGA ATCGGACAAC TGAAATGGGA ACTGGAAGAT
TACTGCTTCC GTTACCTCCA TCCAACCGAA TACAAACGAA TTGCCAAACT GCTGCATGAA
CGGCGTCTCG ACCGCGAACA CTACATCGAA GAGTTCGTTG GTCATCTGCG CGCTGAGATG
AAAGCTGAAG GCGTTAAAGC GGAAGTGTAT GGTCGTCCGA AACACATCTA CAGCATCTGG
CGTAAAATGC AGAAAAAGAA CCTCGCCTTT GATGAGCTGT TTGATGTGCG TGCGGTACGT
ATTGTCGCCG AGCGTTTACA GGATTGCTAT GCCGCACTGG GGATAGTGCA CACTCACTAT
CGCCACCTGC CGGATGAGTT TGACGATTAC GTCGCTAACC CGAAACCAAA CGGTTATCAG
TCTATTCATA CCGTGGTTCT GGGGCCGGGT GGAAAAACCG TTGAGATCCA AATCCGCACC
AAACAGATGC ATGAAGATGC AGAGTTGGGT GTTGCTGCGC ACTGGAAATA TAAAGAGGGC
GCGGCTGCTG GCGGCGCACG TTCGGGACAT GAAGACCGGA TTGCCTGGCT GCGTAAACTG
ATTGCGTGGC AGGAAGAGAT GGCTGATTCC GGCGAAATGC TCGACGAAGT ACGTAGTCAG
GTCTTTGACG ACCGGGTGTA CGTCTTTACG CCGAAAGGTG ATGTCGTTGA TTTGCCTGCG
GGATCAACGC CGCTGGACTT CGCTTACCAC ATCCACAGTG ATGTCGGACA CCGCTGCATC
GGGGCAAAAA TTGGCGGGCG CATTGTGCCG TTCACCTACC AGCTGCAGAT GGGCGACCAG
ATTGAAATTA TCACCCAGAA ACAGCCGAAC CCCAGCCGTG ACTGGTTAAA CCCAAACCTC
GGTTACGTCA CAACCAGCCG TGGGCGTTCG AAAATTCACG CCTGGTTCCG TAAACAGGAC
CGTGACAAAA ACATTCTGGC TGGGCGGCAA ATCCTTGACG ACGAGCTGGA ACATCTGGGG
ATCAGCCTGA AAGAAGCAGA AAAACATCTG CTGCCGCGTT ACAACTTCAA TGATGTCGAC
GAGTTGCTGG CGGCGATTGG TGGCGGGGAT ATCCGTCTCA ATCAGATGGT GAACTTCCTG
CAATCGCAAT TTAATAAGCC GAGTGCCGAA GAGCAGGACG CCGCCGCGCT GAAGCAACTT
CAGCAAAAAA GCTACACGCC GCAAAACCGC AGTAAAGATA ACGGTCGCGT GGTAGTCGAA
GGTGTTGGCA ACCTGATGCA CCACATCGCG CGCTGCTGCC AGCCGATTCC TGGAGATGAG
ATTGTCGGCT TCATTACCCA GGGGCGCGGT ATTTCAGTAC ACCGCGCCGA TTGCGAACAA
CTGGCGGAAC TGCGCTCCCA TGCGCCAGAA CGCATTGTTG ACGCGGTATG GGGTGAGAGC
TACTCCGCCG GATATTCGCT GGTGGTCCGC GTGGTAGCTA ATGATCGTAG TGGGTTGTTA
CGTGATATCA CGACCATTCT CGCCAACGAG AAGGTGAACG TGCTTGGCGT TGCCAGCCGT
AGCGACACCA AACAGCAACT GGCGACCATC GACATGACCA TTGAGATTTA CAACCTGCAA
GTGCTGGGGC GCGTGCTGGG TAAACTCAAC CAGGTGCCGG ATGTTATCGA CGCGCGTCGG
TTGCACGGGA GTTAG
 
Protein sequence
MVAVRSAHIN KAGEFDPEKW IASLGITSQK SCECLAETWA YCLQQTQGHP DASLLLWRGV 
EMVEILSTLS MDIDTLRAAL LFPLADANVV SEDVLRESVG KSVVNLIHGV RDMAAIRQLK
ATHTDSVSSE QVDNVRRMLL AMVDDFRCVV IKLAERIAHL REVKDAPEDE RVLAAKECTN
IYAPLANRLG IGQLKWELED YCFRYLHPTE YKRIAKLLHE RRLDREHYIE EFVGHLRAEM
KAEGVKAEVY GRPKHIYSIW RKMQKKNLAF DELFDVRAVR IVAERLQDCY AALGIVHTHY
RHLPDEFDDY VANPKPNGYQ SIHTVVLGPG GKTVEIQIRT KQMHEDAELG VAAHWKYKEG
AAAGGARSGH EDRIAWLRKL IAWQEEMADS GEMLDEVRSQ VFDDRVYVFT PKGDVVDLPA
GSTPLDFAYH IHSDVGHRCI GAKIGGRIVP FTYQLQMGDQ IEIITQKQPN PSRDWLNPNL
GYVTTSRGRS KIHAWFRKQD RDKNILAGRQ ILDDELEHLG ISLKEAEKHL LPRYNFNDVD
ELLAAIGGGD IRLNQMVNFL QSQFNKPSAE EQDAAALKQL QQKSYTPQNR SKDNGRVVVE
GVGNLMHHIA RCCQPIPGDE IVGFITQGRG ISVHRADCEQ LAELRSHAPE RIVDAVWGES
YSAGYSLVVR VVANDRSGLL RDITTILANE KVNVLGVASR SDTKQQLATI DMTIEIYNLQ
VLGRVLGKLN QVPDVIDARR LHGS