| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0900 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 963017 |
|---|
| End bp | 964357 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | ACX38583 |
|---|
| Protein GI | 260448161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAC AATCCAGTCC TGTTATTACT GATATGAAAG TCATTCCGGT GGCCGGGCAT
GACAGCATGT TGCTTAATAT TGGTGGGGCA CATAACGCAT ATTTCACCCG CAATATTGTG
GTACTCACCG ATAACGCCGG GCATACCGGC ATTGGTGAAG CGCCGGGCGG AGATGTGATT
TATCAGACGC TTGTCGATGC TATTCCGATG GTTCTGGGCC AGGAAGTTGC GCGACTGAAT
AAAGTGGTCC AGCAGGTGCA TAAAGGTAAT CAGGCCGCCG ATTTTGATAC CTTCGGTAAA
GGTGCCTGGA CCTTTGAATT ACGCGTTAAC GCCGTGGCGG CGCTGGAAGC CGCTTTGCTT
GACCTGCTAG GTAAGGCGCT GAATGTTCCG GTCTGCGAAC TGTTAGGGCC AGGCAAGCAA
CGCGAGGCTA TTACCGTCCT CGGTTATCTG TTTTATATCG GTGATCGGAC CAAAACCGAT
CTTCCTTATG TGGAAAATAC GCCGGGCAAC CATGAGTGGT ATCAGTTGCG GCATCAGAAA
GCAATGAACA GCGAAGCCGT TGTGCGTCTG GCGGAAGCCT CACAGGATCG CTACGGCTTT
AAAGATTTCA AACTTAAGGG CGGCGTGTTA CCTGGCGAGC AAGAAATCGA CACTGTTCGT
GCATTGAAGA AACGCTTCCC GGATGCGCGG ATTACCGTTG ATCCCAACGG TGCATGGCTG
CTTGATGAAG CCATTTCTTT ATGCAAAGGG CTGAATGATG TTCTTACCTA TGCCGAAGAT
CCATGCGGCG CAGAACAGGG CTTCTCCGGA CGTGAAGTGA TGGCGGAATT TCGACGGGCG
ACCGGCTTGC CCGTCGCGAC TAACATGATC GCCACCAACT GGCGCGAAAT GGGTCATGCG
GTGATGCTCA ATGCGGTAGA TATTCCACTT GCCGATCCGC ACTTCTGGAC GCTTTCCGGT
GCAGTCCGTG TGGCGCAGCT TTGCGACGAC TGGGGGCTGA CCTGGGGCTG CCATTCTAAT
AACCATTTCG ATATCTCTCT GGCGATGTTT ACCCATGTGG GCGCGGCGGC ACCGGGTAAT
CCTACCGCTA TCGATACCCA CTGGATTTGG CAGGAGGGCG ATTGTCGCCT GACCCAAAAT
CCGCTGGAGA TTAAAAACGG AAAAATTGCC GTTCCTGATG CGCCCGGTCT GGGCGTGGAA
CTGGACTGGG AACAGGTACA AAAGGCACAT GAGGCCTATA AACGTCTGCC TGGCGGTGCG
CGTAACGACG CAGGTCCGAT GCAGTACCTG ATCCCCGGCT GGACCTTTGA CCGTAAACGT
CCCGTTTTCG GCCGTCATTG A
|
|---|
| Protein sequence | MATQSSPVIT DMKVIPVAGH DSMLLNIGGA HNAYFTRNIV VLTDNAGHTG IGEAPGGDVI
YQTLVDAIPM VLGQEVARLN KVVQQVHKGN QAADFDTFGK GAWTFELRVN AVAALEAALL
DLLGKALNVP VCELLGPGKQ REAITVLGYL FYIGDRTKTD LPYVENTPGN HEWYQLRHQK
AMNSEAVVRL AEASQDRYGF KDFKLKGGVL PGEQEIDTVR ALKKRFPDAR ITVDPNGAWL
LDEAISLCKG LNDVLTYAED PCGAEQGFSG REVMAEFRRA TGLPVATNMI ATNWREMGHA
VMLNAVDIPL ADPHFWTLSG AVRVAQLCDD WGLTWGCHSN NHFDISLAMF THVGAAAPGN
PTAIDTHWIW QEGDCRLTQN PLEIKNGKIA VPDAPGLGVE LDWEQVQKAH EAYKRLPGGA
RNDAGPMQYL IPGWTFDRKR PVFGRH
|
|---|
| |