Gene EcDH1_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0892 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp954245 
End bp955534 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content52% 
IMG OID 
Productserine transporter 
Protein accessionACX38575 
Protein GI260448153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0202457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGA CTCAAACCAG CACGATTGCG TCGAAAGACT CTCGTAGTGC CTGGCGCAAG 
ACAGACACCA TGTGGATGCT GGGCCTTTAC GGCACGGCAA TCGGCGCGGG CGTGCTGTTC
CTGCCAATCA ACGCCGGTGT TGGCGGTATG ATCCCGCTGA TCATCATGGC TATCCTTGCG
TTCCCGATGA CGTTTTTTGC TCACCGCGGC CTGACTCGCT TCGTACTGTC TGGTAAAAAC
CCGGGCGAAG ACATCACCGA GGTTGTAGAA GAACACTTTG GTATTGGCGC AGGTAAACTG
ATTACCCTGC TCTACTTCTT CGCTATCTAC CCGATCCTGC TGGTTTATAG CGTGGCAATC
ACCAATACCG TTGAAAGCTT CATGTCTCAC CAGCTGGGTA TGACGCCACC GCCGCGTGCG
ATTCTGTCGC TGATCCTGAT CGTGGGTATG ATGACCATCG TTCGCTTCGG TGAGCAGATG
ATCGTTAAAG CGATGAGTAT TCTGGTATTC CCGTTTGTTG GCGTACTGAT GCTGCTGGCT
CTGTACCTGA TCCCGCAGTG GAACGGCGCT GCACTGGAAA CGCTGTCTCT GGACACTGCA
TCTGCAACCG GAAACGGTCT GTGGATGACC CTGTGGCTGG CAATTCCGGT AATGGTGTTC
TCGTTCAACC ACTCTCCGAT CATCTCTTCT TTCGCCGTTG CGAAGCGTGA AGAGTACGGC
GATATGGCAG AACAGAAATG CTCGAAGATC CTGGCATTCG CACACATCAT GATGGTGCTG
ACCGTAATGT TCTTCGTCTT CAGCTGTGTA CTGAGCCTGA CTCCGGCAGA CCTGGCTGCG
GCTAAAGAGC AGAACATCTC GATTCTGTCT TACCTGGCTA ACCACTTTAA CGCACCGGTT
ATCGCGTGGA TGGCTCCGAT TATCGCGATT ATCGCTATCA CCAAATCCTT CCTCGGTCAC
TACCTGGGCG CACGTGAAGG CTTCAACGGT ATGGTGATTA AATCTCTGCG TGGTAAAGGT
AAGTCTATCG AAATCAACAA GCTGAACCGT ATCACTGCGC TGTTCATGCT GGTAACGACC
TGGATTGTTG CCACCCTGAA CCCGAGCATC CTGGGTATGA TTGAAACCCT GGGCGGTCCA
ATCATCGCGA TGATCCTGTT CCTGATGCCG ATGTACGCAA TTCAGAAAGT ACCGGCAATG
CGTAAGTACA GCGGTCACAT CAGCAACGTA TTCGTTGTCG TGATGGGTCT GATTGCAATC
TCCGCAATCT TCTACTCTCT GTTCAGCTAA
 
Protein sequence
METTQTSTIA SKDSRSAWRK TDTMWMLGLY GTAIGAGVLF LPINAGVGGM IPLIIMAILA 
FPMTFFAHRG LTRFVLSGKN PGEDITEVVE EHFGIGAGKL ITLLYFFAIY PILLVYSVAI
TNTVESFMSH QLGMTPPPRA ILSLILIVGM MTIVRFGEQM IVKAMSILVF PFVGVLMLLA
LYLIPQWNGA ALETLSLDTA SATGNGLWMT LWLAIPVMVF SFNHSPIISS FAVAKREEYG
DMAEQKCSKI LAFAHIMMVL TVMFFVFSCV LSLTPADLAA AKEQNISILS YLANHFNAPV
IAWMAPIIAI IAITKSFLGH YLGAREGFNG MVIKSLRGKG KSIEINKLNR ITALFMLVTT
WIVATLNPSI LGMIETLGGP IIAMILFLMP MYAIQKVPAM RKYSGHISNV FVVVMGLIAI
SAIFYSLFS