Gene EcDH1_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0565 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp597495 
End bp598286 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content49% 
IMG OID 
ProductPTS system, mannose/fructose/sorbose family, IID subunit 
Protein accessionACX38253 
Protein GI260447831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATCTG AAATCAGTAA AAAAGATATC ACCCGTCTGG GCTTTCGTTC GTCGCTGCTG 
CAAGCGAGCT TTAACTACGA AAGGATGCAG GCGGGCGGTT TTACCTGGGC GATGTTGCCG
ATCCTGAAAA AGATTTATAA GGACGACAAA CCGGGCTTAA GCGCGGCGAT GAAAGATAAC
CTCGAATTTA TTAATACCCA CCCGAATCTG GTCGGATTCC TGATGGGGTT ATTAATTTCG
ATGGAAGAAA AAGGAGAAAA CCGCGACACC ATTAAAGGCC TCAAAGTGGC ACTGTTTGGC
CCAATCGCCG GGATTGGCGA TGCGATTTTC TGGTTTACTT TGTTGCCGAT TATGGCGGGA
ATTTGCTCAT CATTTGCCAG CCAGGGAAAC CTGCTGGGGC CGATTCTATT TTTCGCCGTT
TACCTGCTTA TCTTTTTCCT GCGCGTCGGC TGGACCCACG TCGGTTATTC AGTCGGCGTG
AAGGCGATCG ATAAAGTGCG AGAGAACTCG CAGATGATTG CCCGTTCGGC AACCATCCTC
GGGATCACGG TAATCGGCGG GCTGATCGCT TCGTATGTGC ATATTAACGT GGTGACATCG
TTTGCCATCG ACAATACCCA CAGCGTTGCG CTGCAGCAGG ATTTCTTCGA TAAAGTCTTC
CCGAACATTT TACCGATGGC CTACACCCTG CTGATGTATT ACTTCCTGCG GGTGAAAAAA
GCGCATCCGG TGCTGTTAAT CGGCGTGACT TTTGTGCTCT CTATTGTTTG TTCCGCATTC
GGCATTTTGT AA
 
Protein sequence
MGSEISKKDI TRLGFRSSLL QASFNYERMQ AGGFTWAMLP ILKKIYKDDK PGLSAAMKDN 
LEFINTHPNL VGFLMGLLIS MEEKGENRDT IKGLKVALFG PIAGIGDAIF WFTLLPIMAG
ICSSFASQGN LLGPILFFAV YLLIFFLRVG WTHVGYSVGV KAIDKVRENS QMIARSATIL
GITVIGGLIA SYVHINVVTS FAIDNTHSVA LQQDFFDKVF PNILPMAYTL LMYYFLRVKK
AHPVLLIGVT FVLSIVCSAF GIL