Gene EcDH1_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0546 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp580397 
End bp581275 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID 
Productpeptidase U32 
Protein accessionACX38234 
Protein GI260447812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATT CCTTAGGGCC AGTGCTGTGG TACTGGCCAA AAGAGACGCT GGAAGAATTT 
TATCAGCAGG CCGCCACCAG CAGCGCCGAC GTGATTTATC TTGGTGAAGC GGTATGCAGC
AAGCGTCGGG CAACCAAAGT TGGCGACTGG CTGGAGATGG CAAAATCGCT CGCCGGGAGT
GGTAAGCAGA TTGTGCTCTC CACGCTGGCG CTGGTGCAGG CATCATCTGA ACTGGGCGAA
CTGAAACGCT ATGTTGAGAA CGGTGAGTTT CTGATTGAAG CCAGCGATCT CGGCGTGGTG
AATATGTGCG CTGAACGCAA ACTGCCGTTC GTCGCCGGGC ACGCGCTGAA CTGCTACAAC
GCGGTGACAC TGAAAATATT GCTCAAACAG GGCATGATGC GCTGGTGTAT GCCAGTGGAG
CTTTCCCGCG ACTGGCTGGT GAATCTGCTT AATCAGTGCG ATGAGCTGGG CATTCGTAAC
CAGTTTGAAG TGGAAGTCCT GAGCTACGGT CATCTGCCGC TGGCCTACTC CGCCCGCTGC
TTTACCGCGC GTTCGGAAGA CCGCCCGAAA GATGAGTGTG AAACCTGCTG CATTAAGTAT
CCGAACGGGC GCAACGTGCT GTCGCAGGAA AACCAACAAG TGTTTGTACT CAATGGCATT
CAGACCATGA GCGGCTACGT TTACAACCTC GGTAACGAGC TGGCATCCAT GCAGGGCCTG
GTTGATGTGG TCCGCCTGTC ACCGCAGGGT ACTGACACTT TCGCGATGCT CGACGCCTTC
CGCGCTAATG AAAATGGCGC TGCACCACTG CCGTTGACGG CGAACAGCGA CTGTAACGGC
TACTGGCGGC GGCTGGCAGG ACTGGAGCTG CAAGCCTAA
 
Protein sequence
MKYSLGPVLW YWPKETLEEF YQQAATSSAD VIYLGEAVCS KRRATKVGDW LEMAKSLAGS 
GKQIVLSTLA LVQASSELGE LKRYVENGEF LIEASDLGVV NMCAERKLPF VAGHALNCYN
AVTLKILLKQ GMMRWCMPVE LSRDWLVNLL NQCDELGIRN QFEVEVLSYG HLPLAYSARC
FTARSEDRPK DECETCCIKY PNGRNVLSQE NQQVFVLNGI QTMSGYVYNL GNELASMQGL
VDVVRLSPQG TDTFAMLDAF RANENGAAPL PLTANSDCNG YWRRLAGLEL QA