Gene EcDH1_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0347 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp387210 
End bp389753 
Gene Length2544 bp 
Protein Length847 aa 
Translation table11 
GC content54% 
IMG OID 
Productnitrite reductase (NAD(P)H), large subunit 
Protein accessionACX38037 
Protein GI260447615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAG TCAGACTCGC AATTATCGGT AACGGTATGG TCGGCCATCG CTTTATCGAA 
GATCTTCTTG ATAAATCTGA TGCGGCCAAC TTTGATATTA CCGTTTTCTG TGAAGAACCG
CGCATCGCTT ATGACCGCGT ACACCTCTCG TCTTACTTCT CTCACCACAC CGCCGAAGAG
CTGTCGCTGG TGCGCGAAGG CTTCTACGAG AAACACGGCA TCAAAGTTCT GGTCGGCGAA
CGCGCTATCA CCATCAACCG TCAGGAGAAG GTGATTCACT CCAGCGCCGG ACGTACCGTT
TTTTATGACA AGCTGATCAT GGCAACCGGT TCCTACCCGT GGATCCCGCC AATCAAAGGT
TCTGATACTC AGGACTGCTT TGTCTATCGC ACTATTGAAG ACCTCAACGC CATTGAATCC
TGCGCCCGTC GCAGCAAACG CGGTGCCGTT GTTGGTGGCG GCCTGTTAGG TCTGGAAGCC
GCAGGCGCGC TGAAAAACTT AGGTATTGAA ACCCACGTTA TCGAATTTGC CCCTATGCTG
ATGGCAGAAC AGCTTGATCA GATGGGCGGC GAGCAGCTGC GTCGCAAAAT CGAAAGTATG
GGCGTGCGCG TTCACACCAG CAAAAACACC CTTGAGATTG TGCAGGAAGG TGTTGAAGCG
CGTAAAACCA TGCGTTTTGC CGACGGCAGC GAACTGGAAG TCGACTTTAT CGTCTTCTCT
ACCGGTATCC GTCCGCGCGA TAAGCTGGCA ACCCAGTGTG GTCTGGACGT TGCTCCGCGT
GGGGGTATTG TCATTAATGA TTCCTGCCAG ACTTCCGATC CGGATATCTA CGCCATCGGT
GAATGCGCAA GCTGGAACAA CCGTGTATTT GGTCTGGTAG CACCTGGCTA CAAAATGGCG
CAGGTCGCCG TTGACCATAT TCTCGGTAGC GAAAACGCCT TTGAAGGTGC TGACCTTAGC
GCCAAGCTGA AACTGCTGGG CGTAGACGTA GGCGGTATTG GTGATGCGCA CGGTCGCACG
CCTGGCGCAC GTAGCTACGT TTACCTCGAC GAAAGTAAAG AGATCTACAA ACGCCTGATT
GTCAGCGAAG ACAACAAAAC CCTGCTCGGT GCGGTACTGG TGGGCGATAC CAGCGACTAC
GGTAACCTGC TGCAACTGGT GCTGAACGCT ATCGAACTGC CGGAAAACCC GGATTCCCTG
ATCCTGCCAG CACACTCGGG TAGCGGCAAG CCGTCTATCG GTGTTGATAA ACTGCCGGAC
AGCGCGCAAA TCTGCTCCTG CTTCGACGTC ACCAAAGGTG ATCTGATTGC TGCCATCAAC
AAAGGCTGCC ACACAGTTGC GGCGCTGAAA GCTGAAACCA AAGCGGGTAC TGGCTGCGGT
GGCTGTATCC CGCTGGTCAC TCAGGTACTG AACGCGGAAC TGGCGAAACA GGGCATCGAA
GTTAACAACA ACCTGTGCGA ACACTTTGCT TATTCGCGTC AGGAACTGTT CCATTTGATC
CGCGTTGAAG GCATTAAAAC CTTCGAAGAA CTGCTGGCGA AACACGGCAA AGGCTACGGT
TGTGAAGTTT GTAAACCAAC CGTCGGTTCG CTGCTGGCCT CCTGCTGGAA CGAATACATT
CTGAAGCCGG AACATACTCC GCTGCAGGAT TCTAACGACA ACTTCCTCGC TAACATCCAG
AAAGACGGCA CCTACTCGGT GATCCCGCGT TCTCCGGGCG GTGAAATCAC CCCGGAAGGG
CTGATGGCGG TAGGTCGTAT CGCGCGTGAA TTTAATCTCT ACACCAAGAT CACTGGCTCC
CAGCGTCTGG CGATGTTTGG CGCACAGAAA GACGATCTGC CGGAGATCTG GCGTCAGCTG
ATTGAAGCCG GCTTCGAAAC CGGTCATGCC TATGCGAAAG CACTGCGTAT GGCGAAAACC
TGCGTGGGTA GCACCTGGTG CCGCTACGGC GTTGGCGACA GCGTCGGCCT CGGCGTGGAA
CTGGAAAACC GCTACAAAGG CATCCGTACG CCGCACAAAA TGAAGTTCGG TGTCTCCGGC
TGTACCCGTG AATGTTCAGA AGCTCAGGGT AAAGACGTGG GTATTATCGC CACTGAAAAA
GGCTGGAACC TGTATGTTTG CGGTAACGGC GGCATGAAAC CGCGTCATGC GGATCTGCTG
GCGGCGGATA TCGATCGCGA AACGCTGATC AAATATCTCG ACCGCTTCAT GATGTTCTAC
ATCCGTACTG CCGACAAACT GACGCGTACC GCACCGTGGT TAGAAAACCT CGAAGGCGGC
ATCGATTACC TGAAAGCAGT GATCATTGAC GACAAACTGG GGCTGAACGC ACATCTGGAA
GAAGAGATGG CGCGCCTGCG TGAAGCGGTA CTGTGTGAGT GGACTGAAAC GGTCAATACG
CCGTCTGCGC AGACTCGCTT CAAACACTTC ATCAACAGCG ACAAGCGTGA CCCGAACGTG
CAGATGGTGC CAGAGCGCGA ACAGCACCGT CCGGCAACGC CGTATGAACG TATCCCAGTA
ACTCTGGTGG AGGACAACGC ATGA
 
Protein sequence
MSKVRLAIIG NGMVGHRFIE DLLDKSDAAN FDITVFCEEP RIAYDRVHLS SYFSHHTAEE 
LSLVREGFYE KHGIKVLVGE RAITINRQEK VIHSSAGRTV FYDKLIMATG SYPWIPPIKG
SDTQDCFVYR TIEDLNAIES CARRSKRGAV VGGGLLGLEA AGALKNLGIE THVIEFAPML
MAEQLDQMGG EQLRRKIESM GVRVHTSKNT LEIVQEGVEA RKTMRFADGS ELEVDFIVFS
TGIRPRDKLA TQCGLDVAPR GGIVINDSCQ TSDPDIYAIG ECASWNNRVF GLVAPGYKMA
QVAVDHILGS ENAFEGADLS AKLKLLGVDV GGIGDAHGRT PGARSYVYLD ESKEIYKRLI
VSEDNKTLLG AVLVGDTSDY GNLLQLVLNA IELPENPDSL ILPAHSGSGK PSIGVDKLPD
SAQICSCFDV TKGDLIAAIN KGCHTVAALK AETKAGTGCG GCIPLVTQVL NAELAKQGIE
VNNNLCEHFA YSRQELFHLI RVEGIKTFEE LLAKHGKGYG CEVCKPTVGS LLASCWNEYI
LKPEHTPLQD SNDNFLANIQ KDGTYSVIPR SPGGEITPEG LMAVGRIARE FNLYTKITGS
QRLAMFGAQK DDLPEIWRQL IEAGFETGHA YAKALRMAKT CVGSTWCRYG VGDSVGLGVE
LENRYKGIRT PHKMKFGVSG CTRECSEAQG KDVGIIATEK GWNLYVCGNG GMKPRHADLL
AADIDRETLI KYLDRFMMFY IRTADKLTRT APWLENLEGG IDYLKAVIID DKLGLNAHLE
EEMARLREAV LCEWTETVNT PSAQTRFKHF INSDKRDPNV QMVPEREQHR PATPYERIPV
TLVEDNA