Gene EcDH1_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0089 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp92418 
End bp93443 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content51% 
IMG OID 
ProductL-threonine 3-dehydrogenase 
Protein accessionACX37787 
Protein GI260447365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGT TATCCAAACT GAAAGCGGAA GAGGGCATCT GGATGACCGA CGTTCCTGTA 
CCGGAACTCG GGCATAACGA TCTGCTGATT AAAATCCGTA AAACAGCCAT CTGCGGGACT
GACGTTCACA TCTATAACTG GGATGAGTGG TCGCAAAAAA CCATCCCGGT GCCGATGGTC
GTGGGCCATG AATATGTCGG TGAAGTGGTA GGTATTGGTC AGGAAGTGAA AGGCTTCAAG
ATCGGCGATC GCGTTTCTGG CGAAGGCCAT ATCACCTGTG GTCATTGCCG CAACTGTCGT
GGTGGTCGTA CCCATTTGTG CCGCAACACG ATAGGCGTTG GTGTTAATCG CCCGGGCTGC
TTTGCCGAAT ATCTGGTGAT CCCGGCATTC AACGCCTTCA AAATCCCCGA CAATATTTCC
GATGACTTAG CCGCAATTTT TGATCCCTTC GGTAACGCCG TGCATACCGC GCTGTCGTTT
GATCTGGTGG GCGAAGATGT GCTGGTTTCT GGTGCAGGCC CGATTGGTAT TATGGCAGCG
GCGGTGGCGA AACACGTTGG TGCACGCAAT GTGGTGATCA CTGATGTTAA CGAATACCGC
CTTGAGCTGG CGCGTAAAAT GGGTATCACC CGTGCGGTTA ACGTCGCCAA AGAAAATCTC
AATGACGTGA TGGCGGAGTT AGGCATGACC GAAGGTTTTG ATGTCGGTCT GGAAATGTCC
GGTGCGCCGC CAGCGTTTCG TACCATGCTT GACACCATGA ATCACGGCGG CCGTATTGCG
ATGCTGGGTA TTCCGCCGTC TGATATGTCT ATCGACTGGA CCAAAGTGAT CTTTAAAGGC
TTGTTCATTA AAGGTATTTA CGGTCGTGAG ATGTTTGAAA CCTGGTACAA GATGGCGGCG
CTGATTCAGT CTGGCCTCGA TCTTTCGCCG ATCATTACCC ATCGTTTCTC TATCGATGAT
TTCCAGAAGG GCTTTGACGC TATGCGTTCG GGCCAGTCCG GGAAAGTTAT TCTGAGCTGG
GATTAA
 
Protein sequence
MKALSKLKAE EGIWMTDVPV PELGHNDLLI KIRKTAICGT DVHIYNWDEW SQKTIPVPMV 
VGHEYVGEVV GIGQEVKGFK IGDRVSGEGH ITCGHCRNCR GGRTHLCRNT IGVGVNRPGC
FAEYLVIPAF NAFKIPDNIS DDLAAIFDPF GNAVHTALSF DLVGEDVLVS GAGPIGIMAA
AVAKHVGARN VVITDVNEYR LELARKMGIT RAVNVAKENL NDVMAELGMT EGFDVGLEMS
GAPPAFRTML DTMNHGGRIA MLGIPPSDMS IDWTKVIFKG LFIKGIYGRE MFETWYKMAA
LIQSGLDLSP IITHRFSIDD FQKGFDAMRS GQSGKVILSW D