Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_1132 |
Symbol | omp-1S |
ID | 3927156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 1154038 |
End bp | 1154913 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637902246 |
Product | major outer membrane protein OMP-1S |
Protein accession | YP_507916 |
Protein GI | 88657920 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA AAAACAAGTT TATTATAGCT ACAGCATTGG TATATTTACT GTCATTACCT AGTGTATCGT TTTCAGAGGT TACAAACAGC AGTATTAAAA AACACTCTGG GTTATATATT AGTGGACAAT ACAAACCAAG TGTTTCTGTT TTTAGTAGTT TCTCAATTAA AGAAACTAAC ACTATCACAA AAAATCTTAT AGCGTTAAAA AAAGATATTA ACTCTCTTGA AGTTAACGCC GATGCTAGTC AAGGTATTAG TCATCCAGGA AATTTTACTA TACCTTATAT AGCAGCATTT GAAGATAATG CTTTTAATTT CAACGGTGCT ATTGGTTACA TTACTGAAGG TCTAAGGATT GAAATAGAAG GTTCCTATGA AGAATTTGAT GCTAAAAACC CTGGAGGTTA TGGTCTAAAT GATGCCTTTC GGTACTTTGC TTTAGCACGT GATATGGAAA GCAACAAGTT CCAACCAAAA GCACAAAGCT CACAAAAAGT ATTTCACACT GTAATGAAGA GTGATGGGTT ATCTATAATA TCTATCATGG TTAACGGCTG TTATGATTTT TCTTCGGATA ATTTATTAGT ATCACCTTAT ATATGTGGAG GTATAGGTGT GGATGCAATA GAATTTTTTG ACGCATTACA CATTAAACTT GCGTGCCAAA GCAAATTAGG CATCACTTAT CAATTATCTT ATAATATCAG CTTATTTGCT GATGGATATT ATCATCAAGT AATAGGTAAC CAATTCAGAA ATTTAAACGT TCAACATGTA GCTGAACTTA ATGATGCACC TAAAGTTACA TCTGCAGTTG CCACACTTAA TGTTGGATAT TTCGGCGCTG AAGTTGGAGT AAGATTTATA TTTTAA
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Protein sequence | MNKKNKFIIA TALVYLLSLP SVSFSEVTNS SIKKHSGLYI SGQYKPSVSV FSSFSIKETN TITKNLIALK KDINSLEVNA DASQGISHPG NFTIPYIAAF EDNAFNFNGA IGYITEGLRI EIEGSYEEFD AKNPGGYGLN DAFRYFALAR DMESNKFQPK AQSSQKVFHT VMKSDGLSII SIMVNGCYDF SSDNLLVSPY ICGGIGVDAI EFFDALHIKL ACQSKLGITY QLSYNISLFA DGYYHQVIGN QFRNLNVQHV AELNDAPKVT SAVATLNVGY FGAEVGVRFI F
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