Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_1123 |
Symbol | omp-1Q |
ID | 3927924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 1146494 |
End bp | 1147387 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637902237 |
Product | major outer membrane protein OMP-1Q |
Protein accession | YP_507907 |
Protein GI | 88658592 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.818787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATG CAAAGGTCTT TATATTAATA TGTTTAATAT TGCTTGTGCC TTCATTATCC TTTGCAATTG TAAACAATGA TTTCTTAAAG GACAATATAG GTCATTTTTA TATAGGAGGA CAATATAAAC CAGGTGTTCC ACGTTTTAAT AGATTTTTAG TAACTAATAA CAACATAAGA GAGCTAATGT CCTCAGATGA AGAGTGTAGA AGTACTATAC CTCACATGGT GCAAAGTGTA GCACAAGGTA CTTTACCACC TGAAGCGTTG GAAGAGCTTG CAAAAGGATT GCTACATGGA GGTTATCTTT TTTTTACTTT ACCTTATAAC CCTACATACA AGAAAAATTT ATTAGGTGCA GGTGGTGTTA TAGGGTATTC AACCACTCAT TTTAGAGTAG AAGTTGAAGC TTTTTATGAG AAGTTCAATT TAACTGCCCC TGCAGGATAC CTTCATAAAA ATTTTTACGA GTATTTTGCT TTAGCAACTA CAATGGATAC TAAACATCCA CATCAATCTG CAGAAGATAA ATATTATTAT ATGAAAAACA CAGGTATTAC TTTATCACCT TTTATAATTA ATGCATGTTA TGATTTTATT TTAAAAAAGA CACGCAATGT AGCTCCTTAT TTATGTCTTG GGGTTGGTGG TAATTTTATT GATTTTCTAG ATCAAGTAAG CTTTAAATTT GCTTATCAAG CTAAGGTTGG TATTAGTTAT TTTGTTTCTC CAAATATAGC ATTCTTTATT GATGGATCTT TTCATGGACA CTTAAATAAT CAATTTTCTG ATTTGCCAGT AGTAGATTAC TCATCTTCCG GGTTCCCAAC TATATCAGCA AAATTTAACG CCAATTTTCT TACTAGCAGT ATCGGAATCA GGTTTATTTC TTAA
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Protein sequence | MSYAKVFILI CLILLVPSLS FAIVNNDFLK DNIGHFYIGG QYKPGVPRFN RFLVTNNNIR ELMSSDEECR STIPHMVQSV AQGTLPPEAL EELAKGLLHG GYLFFTLPYN PTYKKNLLGA GGVIGYSTTH FRVEVEAFYE KFNLTAPAGY LHKNFYEYFA LATTMDTKHP HQSAEDKYYY MKNTGITLSP FIINACYDFI LKKTRNVAPY LCLGVGGNFI DFLDQVSFKF AYQAKVGISY FVSPNIAFFI DGSFHGHLNN QFSDLPVVDY SSSGFPTISA KFNANFLTSS IGIRFIS
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