| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_1121 |
|---|
| Symbol | omp-1N |
|---|
| ID | 3927836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 1145077 |
|---|
| End bp | 1145931 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637902235 |
|---|
| Product | major outer membrane protein Omp-1N |
|---|
| Protein accession | YP_507905 |
|---|
| Protein GI | 88658428 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0113981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA GGAGTAACAG AAAGTTTGTT TTGTGGGTTA TGTTAATATT ATTTACACCA
CATATTTCTT TAGCATCAGT TTTAAATGAC CATAATTCTA TGTATGTTGG TATTCAGTAC
AAGCCAGCCA GACAACACCT ATCAAAACTT CTTATAAAAG AAAGCGCAGC CAACACTGTA
GAAGTTTTTG GGTTAAAAAA AGACTTACTA AATGATCTAT TAACTGGTAT TAAAGATAAT
ACTAATTTTA ATATAAAATA CAACCCATAT TATGAAAATA ATCGTTTAGG TTTTTCCGGT
ATATTTGGAT ATTACTATAA CAAAAATTTC AGAATAGAAT CTGAACTTTC TTACGAAACT
TTCCACATAA AGAACAACGG ATATAAAAGA ATTGATTGTG AAAAGCATTT TGCTCTTGCA
AAGGAAATAA GCGGTGGTAG TAACAATCCT GCCAATAATA AATATGTTAC CCTAATAAAT
AATGGTATTT CACTTACCTC AGCTCTGATC AACGTTTGTT ATGATGTTGA CGGACTTAAA
CATAATATAA TAACGTATTC ATGTTTAGGA TTTGGAGTAG ACACAATTGA TTTTCTCAGT
AAGTATACTA CAAAGTTTTC ATACCAAGGA AAATTAGGAG CTAGTTATAC TGTTTCTCCT
CAAGTATCGG TTTTTATAGA AGGTTATTAT CATGGTTTAT TTGGTAAAAA ATTTGAGAAA
ATTCCTGTAA ATTATCCATG TGACTATCCA TCACCAACAC CACCAAACAG CAAGCCACAT
GTTCACACTA CAGCATTAGC TATGTTAAGT ATTGGATATT ACGGTGGGAG TATTGGAATA
AAGTTTATAT TATAA
|
|---|
| Protein sequence | MSKRSNRKFV LWVMLILFTP HISLASVLND HNSMYVGIQY KPARQHLSKL LIKESAANTV
EVFGLKKDLL NDLLTGIKDN TNFNIKYNPY YENNRLGFSG IFGYYYNKNF RIESELSYET
FHIKNNGYKR IDCEKHFALA KEISGGSNNP ANNKYVTLIN NGISLTSALI NVCYDVDGLK
HNIITYSCLG FGVDTIDFLS KYTTKFSYQG KLGASYTVSP QVSVFIEGYY HGLFGKKFEK
IPVNYPCDYP SPTPPNSKPH VHTTALAMLS IGYYGGSIGI KFIL
|
|---|
| |