| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_1020 |
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| Symbol | |
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| ID | 3927228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia chaffeensis str. Arkansas |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007799 |
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| Strand | + |
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| Start bp | 1044549 |
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| End bp | 1045820 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637902135 |
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| Product | putative outer membrane protein TolC |
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| Protein accession | YP_507806 |
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| Protein GI | 88657721 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.808388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAGCA AATTTAATAT ACGTAAGGTT TGTTATACAT TGATATTGAT ATCTATGTCA
ATTATACCTA ATAACAGTTA TTGTACTAAC TTAGATGAAG CTTTACAGGC TGCATTATCA
AATAACCCCA ACATAAAAGC AAAATTCTAT CATTCCTTAG GGAATAAACA AAAAATTAAA
TTGAATAGCA TATCAAAGTT TTTACCATCA ATTGCATACT CCGTGCAGGT ACATCAGCCA
GAATTATCTC TAACCAACAA TAGTAATAGA ACTATGAGCC TCATAGTTAC TCAACAGCTA
TTCAATGGAG GAGCTGATGC CGCTGCTTTT CAACAATCAA AATACTTAAC AAATATAGAA
GATATTGATT TTTCACTAGA GAAACAAAAT GTTATACTTA ATACAGTAAA AGCTTACATG
AAGGTTTTAA CAACAGCTGA GGTATATAAG TTAACACAGC ATACTAAAAA AGTATTAGCA
GAACATTTAA CAGCCACACA AAAACGTTTT TCTTTAGGAG AAGTTACTAA AACAGATGTC
TCACTAGCTA CTGCTAGGTT ATCATCAGCT ACATCAGAAT TAATCAAAGC TCACGGAGAA
ATGAAAGTTG CAGAAGCTAA CTACATTCAC ATAACAGGAG AAATACCAAC AGATTTACAA
AATCCTGCTA TACCAGCAAT ACCATCATCT GTAGAAGAAG CTTTAGAAAT AGCTCAAAAA
AATAACCTTT CTCTACAAGC ATCTCACAAC GGATATAAAG CAGCTAAGCA GGGTATCTTA
ATGGCAATTG CACATTTACT TCCTTCTATT AGCATATCAT CAATAAATTC TTATACTTAC
TCTAATATTC CTAACACAAA TCCTAAAAAA ATTGACAATC TATTTGAAAT AAAAATGTCA
TTACCTATAT TCCAACAAGG ATTAAACATC GCTGCAATTG CACAATCAAA ACTTGCAGCA
CAACACAAGA TGTATTCACA TTATGAAGTG TTAAACACGA TTAAAGAGTC TGTTATTTCA
AATTGGGAAA ATATTTTCAC TACAAATTCC ATGCTACAAG CAGCTCAAGA TTCTGTGAGA
TATTCAGAAG TAGCATTATT CGGAATAAAA CAGGAAGCAG AGTTAAATTT AAGAACAGTT
CTAGATGTAT TAGATGCAGA GCAAGAATTG CTAAAAGCAA AAGTCAATCT TGTTAATGTA
CAAAGTAATG TCGTGATAAG TATATACAAC CTACTTGCAT TAATAGGACA ACTAAACATT
AATTATATTT AA
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| Protein sequence | MISKFNIRKV CYTLILISMS IIPNNSYCTN LDEALQAALS NNPNIKAKFY HSLGNKQKIK
LNSISKFLPS IAYSVQVHQP ELSLTNNSNR TMSLIVTQQL FNGGADAAAF QQSKYLTNIE
DIDFSLEKQN VILNTVKAYM KVLTTAEVYK LTQHTKKVLA EHLTATQKRF SLGEVTKTDV
SLATARLSSA TSELIKAHGE MKVAEANYIH ITGEIPTDLQ NPAIPAIPSS VEEALEIAQK
NNLSLQASHN GYKAAKQGIL MAIAHLLPSI SISSINSYTY SNIPNTNPKK IDNLFEIKMS
LPIFQQGLNI AAIAQSKLAA QHKMYSHYEV LNTIKESVIS NWENIFTTNS MLQAAQDSVR
YSEVALFGIK QEAELNLRTV LDVLDAEQEL LKAKVNLVNV QSNVVISIYN LLALIGQLNI
NYI
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