Gene ECH_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_1002 
Symbol 
ID3927565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp1028187 
End bp1028960 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content33% 
IMG OID637902118 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_507789 
Protein GI88658348 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGAT TTCTGTTTTT TTTTCTCTTT ATGTTTAGTT CTCTTGATCT ATTTGCAGCA 
CCTGTGCAGT GGCAAATGGG GTTTCAAGCT CCTGCAACAG AAATAATGGA GTCCATCATA
AGGTCCCATA ACTTTGTTAT GTTTGTTATG TCAGGAGTAG TAGTTGTTGT TTTCTCCATC
ATGATCTACG TTCTTATAAG GTTTAGAAAA AAACCAGAAG ATAAAATTAT CTTCAATACT
AAGAATTCTC ATAATGTAGT TTTAGAAATA CTGTGGACGT TAATTCCTTT AATAATTGTA
GGATTTTTAA CCATAAGTAA TGTTAAACTA ATTAGACAAG AACAGAAGAT TCCTAAGGTA
GAAATGACAT TAAAAGCAAT TGGTTACCAA TGGTATTGGG GATATGTGTA TCCAGATTAT
AAAAATTTCA CTTTCGATAG TTACATGAAA ACAACAGATA ATTTGGAAGC TCAAGATTTA
CGCCTACTTG AAGTAGACAA CAGGGTAGTA GTACCTATTA ACACAAACAT TCTGCTACAA
GTAACAAGCG CAGACGTAAT ACATAGTTGG ACAGTACCAG CTTTGGGAGT AAAAATCGAT
GCAGTACCAG GCAGATTAAA TGAAGCATGG TTTAATATAA AAACTCCAGG AGTATACTAT
GGACAGTGTT CAGAACTTTG TGGAAGACTG CATGGATTTA TGCCAATAGT AATAGTTGCT
GTTGAAAAAG AACAATTTGA CGAATGGATA CAAAAAAAGA CACTTGAATT ATAG
 
Protein sequence
MLRFLFFFLF MFSSLDLFAA PVQWQMGFQA PATEIMESII RSHNFVMFVM SGVVVVVFSI 
MIYVLIRFRK KPEDKIIFNT KNSHNVVLEI LWTLIPLIIV GFLTISNVKL IRQEQKIPKV
EMTLKAIGYQ WYWGYVYPDY KNFTFDSYMK TTDNLEAQDL RLLEVDNRVV VPINTNILLQ
VTSADVIHSW TVPALGVKID AVPGRLNEAW FNIKTPGVYY GQCSELCGRL HGFMPIVIVA
VEKEQFDEWI QKKTLEL