Gene ECH_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0860 
Symbol 
ID3927418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp881517 
End bp883436 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content30% 
IMG OID637901977 
ProductUvrD/Rep family helicase 
Protein accessionYP_507655 
Protein GI88657941 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATT ATATAACTTC ACTTAATGAA GACCAGAGGG AAGCTGTCAT TAATATAAAT 
GGTCCTATTT TAATATTAGC CGGAGCAGGT ACAGGTAAAA CTAGAACTAT TACTTCAAGA
ATAGCATACA TCATTAATAA CAATTTTGCA TTACCTAGCC AAATTTTAGC AGTAACATTT
ACTAATAAAG CAGCAAACGA AATGCTATCT AGAATTAGTG AATTAACACC TGTATATAAT
ATCTGGTTAG GAACTTTTCA TGCAATAGCA GCAAAAATCT TAAGACAGCA TGCTGAAGTA
GTTGGATTAA AAAACGATTT TACAATCATT AACACAGACG ACCAACTACA AGTAATAAAA
AATATTGTCA ATGACATGCA TCCCGAATAT GCATCAGATG CCCATAAAAT TATCTTAAAT
AAAATACAAA GATGGAAAGA TAGAGGACTT ATACCAAGCA ATATTACTGA AACAGAGTTA
TATAAACCTA TTAATACAGT AGCATTGAGT ACATATCACA TTTATCAAGA AAGATTAAAA
TTTTTAAACT GCGTTGATTT TGGAGACTTA CTACTATACA ACATTCAAAT ATTCACTACA
CAACATAATG TCTTATCCCA TTACCAAGAA CAATTTAAAT ACATAATGGT TGATGAATAT
CAGGACATAA ATACAATTCA ATATTTATGG TTAAGATTAT TAGCTCAAAA ATACAAAAAT
CTATGCTGTG TTGGAGATGA TGACCAATCA ATATATAGTT GGCGGGGAGC AGAAGTAGGA
AATATTTTAA AATTTTCTGA TGATTTTCCA AATGCAAAAA TTGTTCGATT AGAATGTAAC
TACAGATCAA CATCTAATAT ATTAGACGTT GCCACAGCGA TAATAAATAA CAATAAATCA
AGGTTAGGAA AAAAGCTATG GACAACAAAC GAGAAAGGAC AAAAAGTTAA TTTAATGAAA
TTTTGGGATA GTAAAGCAGA AGCACAGTAT ATATGTGAAT ATATTAAAAA TTTACATGAC
TACCAATTTA ACGAGACAGC TATTTTAGTA AGGGCAGGAT TTCAAACAAG AATATTCGAG
GAATACTTCA TTAAATATAG CATACCATAT AAGATAATTG GTGGTACAAG ATTCTACGAT
AGACAAGAAA TTCGTGATAT CATCGCCTAT TTAAAAATTA CAGTTAACCC TAATAATGAC
ATCGCTTTTG AAAGAATAAT TAATAAACCT AAACGACATA TAGGAGCATC AACTCTTAAT
AAAATATACT TATGTGCTAA ACAAAATAAT ACATATTTTT TGAACGCAGC AAAAATTCTA
ATTTCAAATA ATCAACTACC TGACAAAGCA TCCCGATCTT TAAATAACTT ATTAAATAAG
ATTGACTCTT GGAAAGAATC TTTATCATCT GATTCAATAT CAAACACTGT TAAAATGATA
GCTTACGACT CAGGATATGT AGACATGTTA GAAAACGAAG GTGAAAATGG TTTAGCAAGA
ATAGAAAACA TAAAAGAACT TTTTTCTGCA TTATTAAGTT TTAATGATGT AAATGAATTT
TTAGAACACA TCAGCCTTGT AACAGAAACA GACTCATTAA ATTACAATGA CAACTACACA
TATATTATGA CATTACATGC AGCAAAAGGA TTAGAATTCC CTATAGTTTT TCTACCTGGA
TGGGAAGAAG GAGTATTTCC ACATGAAAAA TCTTTACAAG ACAGAACAGG AGAAGCACTA
GAAGAAGAGA GAAGACTCGC CTATGTTGGG ATTACACGAG CACGTGAACA ACTATTTATA
TCATGCGTAG CAGTAAGAGA TATTAACAAC TGGCGCCAGC AAATGAAAAT ATCAAGATTT
ATAAAGGAAT TACCTGCAGA ACATGTACAA GTTATAAAAA ATATTTCTAG CTATTATTAA
 
Protein sequence
MEDYITSLNE DQREAVININ GPILILAGAG TGKTRTITSR IAYIINNNFA LPSQILAVTF 
TNKAANEMLS RISELTPVYN IWLGTFHAIA AKILRQHAEV VGLKNDFTII NTDDQLQVIK
NIVNDMHPEY ASDAHKIILN KIQRWKDRGL IPSNITETEL YKPINTVALS TYHIYQERLK
FLNCVDFGDL LLYNIQIFTT QHNVLSHYQE QFKYIMVDEY QDINTIQYLW LRLLAQKYKN
LCCVGDDDQS IYSWRGAEVG NILKFSDDFP NAKIVRLECN YRSTSNILDV ATAIINNNKS
RLGKKLWTTN EKGQKVNLMK FWDSKAEAQY ICEYIKNLHD YQFNETAILV RAGFQTRIFE
EYFIKYSIPY KIIGGTRFYD RQEIRDIIAY LKITVNPNND IAFERIINKP KRHIGASTLN
KIYLCAKQNN TYFLNAAKIL ISNNQLPDKA SRSLNNLLNK IDSWKESLSS DSISNTVKMI
AYDSGYVDML ENEGENGLAR IENIKELFSA LLSFNDVNEF LEHISLVTET DSLNYNDNYT
YIMTLHAAKG LEFPIVFLPG WEEGVFPHEK SLQDRTGEAL EEERRLAYVG ITRAREQLFI
SCVAVRDINN WRQQMKISRF IKELPAEHVQ VIKNISSYY