| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0798 |
|---|
| Symbol | thiC |
|---|
| ID | 3927286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 813891 |
|---|
| End bp | 815555 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637901916 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_507596 |
|---|
| Protein GI | 88658541 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG ACTTTAATAC CCTCTTTCCT TCTTCAACTA AAGAATACAT ATCAGGCACA
ATATACAACA ATATAAAAGT TGGAATGCGT AGAATTCATA TTAATGATAA CAGTGAATCC
ATTCTAACAT ATGATACTGG AGGACCACAT ACTGATCAAA AAATCAAAAT TGACATTAAT
CAGGGTATTG AAAAGATAAG GCTTAATTGG ATTGTAGATA GACAAGACGT AGAGTATCAT
AAAAGACAAG AAGTAAACAC AAATTCTGAA TACGCATTTC CACTACAAAG TAATAATATC
TTAAAAGCAA ATAGTAATAA ACCTATAACC CAGATGTATT ATGCTCGAAA CAATATTATT
ACTCCAGAAA TGGAATATGT AGCAATACGA GAAAACGCAC TAAGACAAAA GATTCTTTCT
TATAAACCAA CTGTCATGGC ACCAGAAATT ACTCCAGAAT TCGTACGACA AGAAATAGCA
TCTGGGAGAG CAATCATTCC AGCAAATGTA AATCATCCTG AATCAGAACC AATGATAATA
GGCAAGAATT TCTTAGTAAA AATCAATGCT AATATTGGTA ATTCAGTAGT TAGTTCAAGC
ATTGAAGACG AACTTCAAAA AATGATATAC GCAATTATAT ACGGTGCTGA TACAGTTATG
GATTTATCTA CAGGGAACAA TATACATAAT ATTAGAGAAT GGATTATCAG AAACAGCCCA
GTACCAATAG GTACAGTACC TATATATCAA GCATTAAACA AAGTAAATGG AGTAGTAGGA
GACCTAGATT TCAATATCTT CAAAAAAACA TTAATAGAAC AAGCAGAACA AGGTGTTGAC
TATTTTACCA TACATGCAGG AGTATTAAAA AATTACATTG ACTACACAGA TAACAGGCTA
ACTGGCATCG TATCAAGAGG TGGAGCTATT ATGGCACACT GGTGTACTAT ACATAATAAA
GAGAACTTTC TTTATACAAA TTTTGAAGAA ATATGCGATA TTATGAAACA CTATGACATT
ACTTTCTCTC TAGGAGATGG ATTAAGGCCA GGATCCATAG CAGATGCAAA CGATACAGCA
CAATTTTTAG AACTCAAAAC ACTAGGAGAA CTTACAGACA TTGCATGGAA GCACGATTGC
CAAGTTATGA TAGAAGGACC AGGCCATGTT CCTATGCATT TAATAAAAGA AAATGTAGAA
AAACAGGTTC ACTTCTGTAA GGAAGCTCCA TTCTATACTT TAGGACCATT AACTACAGAC
ATTGCTCCAG GTTACGACCA CATAACGAGT GCAATCGGCG CAGCAATTAT AGGATGGTAT
GGCACTTCTA TGTTGTGTTA TGTTACACCG AAAGAACACT TAGGATTACC TAACATTCAA
GACGTAAAAG ATGGAGTCAT TGCATATAAA ATAGCAGCAC ATGCAGCAGA CTTAGCAAAA
GGTAATCCAT CTGCTTATAT ACGTGATTAT GCATTAAGTT ATGCAAGGTT CAATTTCAAA
TGGTATGATC AATTTAACTT ATCTCTTGAT CCAGAAACGG CAAAATCACT ACACGATGAA
TCTCTTCCTT CTGAGAATGC AAAGTCTGCT CACTTCTGTT CAATGTGTGG GCCAAAATTC
TGCTCAATGA AATTAACTCA TCAAATAAAA TCTATTGAAG AGTAA
|
|---|
| Protein sequence | MKIDFNTLFP SSTKEYISGT IYNNIKVGMR RIHINDNSES ILTYDTGGPH TDQKIKIDIN
QGIEKIRLNW IVDRQDVEYH KRQEVNTNSE YAFPLQSNNI LKANSNKPIT QMYYARNNII
TPEMEYVAIR ENALRQKILS YKPTVMAPEI TPEFVRQEIA SGRAIIPANV NHPESEPMII
GKNFLVKINA NIGNSVVSSS IEDELQKMIY AIIYGADTVM DLSTGNNIHN IREWIIRNSP
VPIGTVPIYQ ALNKVNGVVG DLDFNIFKKT LIEQAEQGVD YFTIHAGVLK NYIDYTDNRL
TGIVSRGGAI MAHWCTIHNK ENFLYTNFEE ICDIMKHYDI TFSLGDGLRP GSIADANDTA
QFLELKTLGE LTDIAWKHDC QVMIEGPGHV PMHLIKENVE KQVHFCKEAP FYTLGPLTTD
IAPGYDHITS AIGAAIIGWY GTSMLCYVTP KEHLGLPNIQ DVKDGVIAYK IAAHAADLAK
GNPSAYIRDY ALSYARFNFK WYDQFNLSLD PETAKSLHDE SLPSENAKSA HFCSMCGPKF
CSMKLTHQIK SIEE
|
|---|
| |