Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0509 |
Symbol | lpdA-1 |
ID | 3927744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 511305 |
End bp | 512696 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637901632 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_507324 |
Protein GI | 88657700 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.317708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATT ATGATATGGT AGTTATTGGT GGTGGTCCTG GGGGTTATAA GTGTGCAATT AGAGGAGCTC AACTTGGATT AAAAGTTGCA TGTATAGATA AAAATGAAAT TTTAGGAGGT ACATGCTTAA GAGTAGGATG TATTCCTTCT AAGGCTTTAT TGCATTTCTC TCATGAGTAT TATCATTTGA AGAATAATTT ATCTGAAGTT GGTATAACAT TTGATAACTT AAATTTTGAC TTAGAAAAAA TTATGTCTTT TAAGGATAAA AACATTGCTG AGTTAGGAAA TGGTATTAGT TATTTGTTTT CTAGCCATAA AATAGATTAT TTATGTGGTG TTGGTAAGAT ACAGTCTGTA GGGCCTAATA ATTTTATTAT TGTTATATCT GGAAATAATG GTAAGCAGGA GATAATAAGT AGGTATGTAG TTATTGCTAC TGGATCTGAT GTTGCAAATT TTCCTGATAT TGATGAAGAA AGAGTAGTAT CTTCTACTGC AGCTTTGTCT TTTAAGGAGC CACCAAAAAG ATTAATAGTC ATAGGGGCTG GGGCTATAGG CTTAGAAATG TCATCTGTAT GGAGTAGATT TGGATCTGAA GTTACTGTTG TTGAATTTTC AGATAAAATT GCTCCTAGTA TGGATGGTGA TATTGGTAAA GCTTTGCTTA CAAGTTTAAA AAAGCAAGGA ATTAATTTTA AATTATCAAC AAAAGTTAGT TCAATTGACA AAAAAGGAAG TAATTTAGCT GTGCATCTTG AGTCTGTGAA AGATGGTAAG TCTGAAATAA TAGAGGCAGA TAAGGTTCTT GTATCTATTG GGCGTGTTCC ATATACGAAT GGGTTGATTG ATAATAATTC CATAGAATGT GATGCTAGAG GATTTATTAA AGTGAATAAT AAGTATGAGA CAAATATACC TGGTGTATTT GCTATTGGTG ATGTTATTGG TGGAGCAATG CTTGCCCATA AAGCAGAAGA AGAAGGTATT GCTGTTGCAG AATTAATTTC TGGGCATGTT CCACATGTGG ATTATGAAAT TATTCCATCC GTAATATATA CTCATCCTGC TGTTGCATCG ATTGGTAAAA CAGAAGAAAG TTTAAAGAAG GTTAATTATA GTTATAATGT TGGTAAGTCT AATTTTTCTG CAAATGGTAG GTCAAAGGTT ACAGATAATG TATCAGGGTT TGTAAAAGTA TTGGCTTCTA AAGAAAATGA TGCTATTTTA GGTGTTCACA TTATTGGTGC ATATGCTGAT ACTATGATTA ATGAAGCTGC GGTTGCTATG GCTTATAGGG CATCATCAGA AGATATATTC CGCATTTGTC ATTCACATCC AGATGTTAAT GAAGCATTTA AAGATGCATG TGAAGCAGCA TTTTTAAAGT GA
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Protein sequence | MQNYDMVVIG GGPGGYKCAI RGAQLGLKVA CIDKNEILGG TCLRVGCIPS KALLHFSHEY YHLKNNLSEV GITFDNLNFD LEKIMSFKDK NIAELGNGIS YLFSSHKIDY LCGVGKIQSV GPNNFIIVIS GNNGKQEIIS RYVVIATGSD VANFPDIDEE RVVSSTAALS FKEPPKRLIV IGAGAIGLEM SSVWSRFGSE VTVVEFSDKI APSMDGDIGK ALLTSLKKQG INFKLSTKVS SIDKKGSNLA VHLESVKDGK SEIIEADKVL VSIGRVPYTN GLIDNNSIEC DARGFIKVNN KYETNIPGVF AIGDVIGGAM LAHKAEEEGI AVAELISGHV PHVDYEIIPS VIYTHPAVAS IGKTEESLKK VNYSYNVGKS NFSANGRSKV TDNVSGFVKV LASKENDAIL GVHIIGAYAD TMINEAAVAM AYRASSEDIF RICHSHPDVN EAFKDACEAA FLK
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