Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0315 |
Symbol | sdhA |
ID | 3928026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 302203 |
End bp | 303999 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637901439 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_507136 |
Protein GI | 88658480 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.62165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGTT CTGCATATGA TATTATAAAT CATGAATATG ATGTTGTAAT AGTAGGAGCT GGAGGAGCAG GTTTAAGAGC AACTTTTGGT ATGACTAATG TTGGTTTATC AGTTGCATGT ATATCTAAAG TTTTTCCTAC ACGAAGTCAT ACAGTAGCAG CTCAAGGTGG TATTAGTGCT GCGTTAGGTA ATGTTTCTGA AGATGACTGG AGATGGCATA TGTTTGATAC GGTCAAAGGT TCAGATTGGC TTGGAGACCA AGATGCTATT GAATATATGT GTAAAAATGC GGCAGAAGCT GTAATTGAGC TTGAACGTTA TGGAGTTCCT TTTTCTCGTA CTAGTGATGG TAAAATATAT CAGCGTCCTT TTGGTGGTAT GACTACAGAG TTTGGTAAAG GTAAGCCAGC AGTACGTACG TGTGCTGCAT CTGATAAAAC AGGTCATGCA ATACTTCACA CATTGTATCA GCAATCTTTA AAGTATAATG CTAAGTTTTT TGTAGAGTAT TTTGCTATTG ATTTAATAAT GGATGAAGAA GGCCAGTGTA AGGGTGTATT AGCATGGTCT TTGTGTGATG GTACGTTACA TAGATTTCGT GCTCATATTG TTGTTCTTGC TACAGGTGGT TATGGAAGGA TATATTTTTC TGCTACTAGT GCACACACTT GTACTGGTGA TGGGGGAGGT ATGGTATCCC GTATTAATTT GCCGCTGGAA GATATGGAAT TTGTACAATT TCACCCGACT GGAATATATG GTGCTGGATG TTTGATAACA GAAGGTTGCA GAGGGGAAGG TGGATATTTA ATTAATTCTG AGGGAGAAAG ATTTATGGAG CGCTATGCTC CAAAAGCTAA AGATTTGGCA TCTCGTGATG TTGTTAGTAG AGCAATGACT TTAGAGATTA GAGAAGGTCG TGGTGTTGGT CCAAAAAAAG ATCATGTATA TTTGTCTATA TCTCATTTAG GTGCAAAAGT TATCAGTGAA AGATTGCCAG GTATTCGTGA GACTGCACGT ACTTTTGCTG GAGTAGATGT TATAAAGGAG CCAATACCAG TTTTACCAAC TGTTCATTAC AATATGGGGG GTATCCCTAC AAATTATCAT GGTGAAGTTG TAACTTTAAG CAATAATACA GAGCAGATAA TACCTGGGCT TTTTGCTATA GGAGAAGCAG CGTGTGTATC TGTACATGGT GCTAACCGTT TAGGGTCTAA TTCATTGCTT GATTTAGTAG TTTTTGGAAG AGCTGCAGCA ATTAGAGCAA AAGAGTTAAT CAAACCCGGA ATGTTACATG CTCCAGTGCA GAAGTCATCA GAAGAGTGGA TAATTGATAG GTTTGATGCG TTAAGGTTTT CAAAAGGAAG TTTACGTGTA TCAGAAATAC GTAGTAACAT GCAAAATGTA ATGCAAAATC ATGCAGCTGT TTTCCGTACA GAAGAAGTGC TTGAAGAAGG CAAGCAAAAG ATAAGAAGTG TTGCTGAGTC TCTGTCTGAA ATTGCGGTTA AAGATAGAAG TATGATATGG AATAGTGATT TGGTTGAAGC ATTAGAGTTA ACTAATATGA TGCCGCAAGC AGTCGTAACA ATGGAATGTG CTGCAAATCG TCAAGAAAGT AGAGGGGCTC ATGCACGTGA AGATTTCCCT GATCGTGATG ATGAGAATTG GATGAAACAT AGCTTAGCAT GGTATAATTC TACAGATTGT TCTGTACATA TAAAGTATAA AGATGTTGCT AAAGCAACTT TAACAGATGA TGTTCAGTAT TTTCCTCCAC AAAAAAGAGT ATATTAA
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Protein sequence | MSGSAYDIIN HEYDVVIVGA GGAGLRATFG MTNVGLSVAC ISKVFPTRSH TVAAQGGISA ALGNVSEDDW RWHMFDTVKG SDWLGDQDAI EYMCKNAAEA VIELERYGVP FSRTSDGKIY QRPFGGMTTE FGKGKPAVRT CAASDKTGHA ILHTLYQQSL KYNAKFFVEY FAIDLIMDEE GQCKGVLAWS LCDGTLHRFR AHIVVLATGG YGRIYFSATS AHTCTGDGGG MVSRINLPLE DMEFVQFHPT GIYGAGCLIT EGCRGEGGYL INSEGERFME RYAPKAKDLA SRDVVSRAMT LEIREGRGVG PKKDHVYLSI SHLGAKVISE RLPGIRETAR TFAGVDVIKE PIPVLPTVHY NMGGIPTNYH GEVVTLSNNT EQIIPGLFAI GEAACVSVHG ANRLGSNSLL DLVVFGRAAA IRAKELIKPG MLHAPVQKSS EEWIIDRFDA LRFSKGSLRV SEIRSNMQNV MQNHAAVFRT EEVLEEGKQK IRSVAESLSE IAVKDRSMIW NSDLVEALEL TNMMPQAVVT MECAANRQES RGAHAREDFP DRDDENWMKH SLAWYNSTDC SVHIKYKDVA KATLTDDVQY FPPQKRVY
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