Gene ECH_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0313 
Symbol 
ID3927373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp299609 
End bp301351 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content29% 
IMG OID637901437 
ProductABC transporter, permease/ATP-binding protein 
Protein accessionYP_507134 
Protein GI88658146 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.532143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGT TATTTCAATT TGTAAGACCT CATTTATTAT ACTTTATATT TGCGTATTTA 
GTTGTAGCTG TTTCTTCTAT ATCAATTTTA GCATTTTTTT ATGAGTTACG TAATTTAGTA
GACTTGTGTA TTGCAACTTC TGATGTTGCA GCCATAAATA ATGCCTTGTT GTTTTTGTTT
AGTATAGTTT TAATAGTAGG GTTATCATCC TTTTTGCGGT TATGGCTTAC TGGTTATGTG
AGTGAGAAAG TTATTCTTGA TATTAGAATA AAATTGTATA ATAAAATTAT ACATTTTTCT
CCCAGGTTTT TTGAAAATAA TAGTATATCA AGTTTAATTA CACGATTAAT GGCAGATACA
GCAACACTGC AAGTTATTTT AAGTACTAGT ATGTCGACAA TACTTAGGAA TACAACAACT
TTGCTTGGTA GTGTTGTGAT GTTAGTACAT ACCAATGTTA AGTTGACTAT GTATACTGTG
ATAATTACTC CTATTATTCT GATAATCTTA GCTTTCTTCG GTAAAAAAGT GAAGGTATTA
TTACGTAAGG TACGCGTAAA TCTGGATAAT GTAACTTCTT TTGTTGAGGA AACATGTCGT
GGAATATATG TTATCCAATC TTTTTCGAGA GAAGATATAA CAAAGCAAAA GTTTTCAAAT
TTGCTTGCTA ATACACTAAG TATGACAAAT AGATATATTG TTTTACGTGC ATTACTAGTT
ACATTAGTTA TAACGCTTAC AATGCTTTCT ATAGGATTTG TCCTATCTTT TGGAATAAGA
GAAGTATTGA ATGGTAATAT GACTGTTGGT TCTCTTTTTT CTTTTATATT TTATGCAATA
ATAGCTGCTA GTTCAATGAA TAATATGGGA GATAATTTTA ATGATATACA GAAAGCTGTG
AAAATTTCAG AAGATATTTC TAAAATGTTG TTGATGCAGA CAGATATTAT TGAAGTAAAA
GATCCATATA AAATTCAGGA AGTACAAGAT AAAATTTCAA TAAACAATGT CACTTTTTAT
TACCCTAGTA AACCTGATAA TCCTGCATTA AAAAATGTAT CATTTACTAT TGAGAAAGGT
CAAGTTGTTG CTTTGGTTGG ACCATCTGGT AGTGGTAAGA GTACAATAGT GAATATATTG
TTACGTTTTT ATGATGTGAA TATAGGTAAT ATTACTATTG ATGGTATGGA TATAAAGAAA
TTATCCTTAA TGAATTTACG TTCTCTATTT AGCATTATTC CTCAAAGTCA TATAATGTTT
TCCGGAACAA TATGGGATAA TATAACTTAT GGGGTAACTA ATGCTGAATA CGAAGATGTA
AGAAATGCAG CAAAAATAGC TTGTATTCTT GATTTTGTAG AAAGTTTACC AGATAAATTT
GATTCTTTAG TTGGAGAAAG GGGGTTGTGT TTATCTGAAG GACAAAAACA AAGAATTGCT
ATAGCAAGAG CTGTTTTAAA GGATTCAGGT GTCCTTGTAT TAGATGAAGC AACATCATCT
TTGGATTCGA AAAATGAACA ACTCATACAT GATGCTTTAG ATAATTTAAG GAATAATAGA
ACAATACTTG TTATAGCCCA TAGGTTGTCA ACTATTCTTA AGGCAGATAA GATAATTGTT
TTTAATAATG GATGTATTGA TGATATAGGT ACTCATAAGT CATTAATGCA GAAGCCAAAT
GGTTTGTATG CGAAATTAGC AAAATTGCAG TTATCAAATG ATAGTTTTTC AGAGGATATT
TAA
 
Protein sequence
MKVLFQFVRP HLLYFIFAYL VVAVSSISIL AFFYELRNLV DLCIATSDVA AINNALLFLF 
SIVLIVGLSS FLRLWLTGYV SEKVILDIRI KLYNKIIHFS PRFFENNSIS SLITRLMADT
ATLQVILSTS MSTILRNTTT LLGSVVMLVH TNVKLTMYTV IITPIILIIL AFFGKKVKVL
LRKVRVNLDN VTSFVEETCR GIYVIQSFSR EDITKQKFSN LLANTLSMTN RYIVLRALLV
TLVITLTMLS IGFVLSFGIR EVLNGNMTVG SLFSFIFYAI IAASSMNNMG DNFNDIQKAV
KISEDISKML LMQTDIIEVK DPYKIQEVQD KISINNVTFY YPSKPDNPAL KNVSFTIEKG
QVVALVGPSG SGKSTIVNIL LRFYDVNIGN ITIDGMDIKK LSLMNLRSLF SIIPQSHIMF
SGTIWDNITY GVTNAEYEDV RNAAKIACIL DFVESLPDKF DSLVGERGLC LSEGQKQRIA
IARAVLKDSG VLVLDEATSS LDSKNEQLIH DALDNLRNNR TILVIAHRLS TILKADKIIV
FNNGCIDDIG THKSLMQKPN GLYAKLAKLQ LSNDSFSEDI