Gene ECH_0233 details

Gene Information

• Locus tag: ECH_0233
• Symbol: secB
• ID: 3927887
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia chaffeensis str. Arkansas
• Kingdom: Bacteria
• Replicon accession: NC_007799
• Strand: +
• Start bp: 220370
• End bp: 220897
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637901357
• Product: preprotein translocase subunit SecB
• Protein accession: YP_507054
• Protein GI: 88658074
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1952] Preprotein translocase subunit SecB
• TIGRFAM ID: [TIGR00809] protein-export chaperone SecB

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0931237
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATGTA AATTGAAAGT TAAGGGTCAA TATATTAAGG ATCTTTCATT TGAAAATCCG 
AATTCTCCAC AAATTTTTTT GATGATTAGT AAAACCCCAC CTGAGATTAA TATTTCTATT 
AATGTTAGTT CTGTAAGTCT TCCAGTAAAA GCACAAGATC AGAGTAGTGA ACAGCCTTCA 
GATAATAAAG TAGAGCCGTT ATATGAAGTT ACTCTACAGG TTAATGCAGA AGCTCGAGTT 
GGTACTACAG TAGCATTTAT TTGCGAAATT AAATATTGTG GTGTATTCTC TATTGAAAGT 
GATGATGTAA GTATAGAGGA ATTAAGTCAG CAAGATATAA GAGATGTATT GTTGATTTCT 
GCTCCAACTA TCCTATTCCC ATTTGTTAGA GAGTTGATTT CTAGAGTTAC TTCTACAGGG 
GGATTCCCTC CGTTAATGCT TGATATTGTT GATTTTAGAG CTATGTATGA ATCTCAGATG 
AAGCAGGGTG TTGGACAGAA TGATAATAGT CAGGATCCAG AAAAATAG 

 

Protein sequence

MSCKLKVKGQ YIKDLSFENP NSPQIFLMIS KTPPEINISI NVSSVSLPVK AQDQSSEQPS 
DNKVEPLYEV TLQVNAEARV GTTVAFICEI KYCGVFSIES DDVSIEELSQ QDIRDVLLIS 
APTILFPFVR ELISRVTSTG GFPPLMLDIV DFRAMYESQM KQGVGQNDNS QDPEK