Gene ECH_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0136 
SymbolvalS 
ID3928065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp124244 
End bp126670 
Gene Length2427 bp 
Protein Length808 aa 
Translation table11 
GC content32% 
IMG OID637901260 
Productvalyl-tRNA synthetase 
Protein accessionYP_506964 
Protein GI88658365 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID[TIGR00422] valyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCTA TTTTTAATAA CAAATATCAA TTTAAAAATA TAGAAACAAA ATACAACACA 
CACTGGAATA TAACAAAACT ATATAAATGG AAAAACTCTG GAAATAATCA GTTTATAATT
GACACTCCCC CTCCAACAAT ATCTGGACAA CTACATATTG GGCATGTCTT TAGCTATTGT
CATACAGATT TTATTGCAAG ATATCAGCGC ATGCTTGGAA AAGATGTATT TTATCCTATA
GGATTTGACG ATAACGGTTT ACCCACAGAA AGGTTAGTAG AAAAAACAAA AAAAATACGT
GCAACAGATA TGAGTCGCAA AGAATTCAAT ACAATATGTA CACAAGTATC AAATGAATTC
AGAATACAAT TTAAACAACT TTTTCAATCT ATTGGAATTA GCTACGACTG GGATCTAGAA
TATCACACAA TTAGCAAAAA TATACAAAAG ATATCTCAAA CATCATTTAT AAATTTATAC
AATAAAGGAA AATTATACAG AAAACTACAA CCTATATTCT GGGATTGCAT TGATAAAACA
GCTATAGCAC GTGCTGAAGT TGAAGAAAAT GAGATATCAT CGTTCATGAA TACAATAACA
TTTTCTACAG AAGCAGGAAT ACCAATCAAC ATTGCAACAA CTCGTCCAGA ACTTATGCCA
GCTTGCGTTG CTGTATTTTT TAATCCTTCA GATACAAGAT ATCAGCATCT CCTTGGGCAA
AATGCGATAG TGCCAATATT TGGCAACAGA GTAAAAATAT TACCAGATGA TCAAGTAAAA
ATAGATAAAG GGACTGGTCT TGTAATGTGC TGTACATTTG GAGACGAAAT GGATGTATAC
TGGTGGAACA AACACAATTT AGATACTAAA ATCATTATTA GCAAATCAGG CACTATATTC
AATCTAAGTA GTGATACCAC TCAAGGAAAA AGTGTATGTA ACCAATTACA TGGGCTACCA
ATAACAAAAG CTAGAGCATT AATTCTTGAA ATATTAGATC AAAACAATTT ACTAAAGCAT
AAACAGGAAA TTATTCACAA TGTAAAATGT GCAGAAAGGT CAGGAGCACC TATCGAAATA
CTATTAAGTC ATCAATGGTT TATCAAAGTA GTAGAAATAA AGCAGGAATT ATTGAAACAA
GTACAAAAAA TCAACTGGTA TCCAAAATCT ATGCGTAAAC AAATAGAAAT TTGGATAGAA
GGCTTAAATT GGGATTGGTG TATATCACGT CAAAGATATT TTGGCGTACC ATTTCCAGTT
TGGTATTCTA AAAAAGCAGA TGGTGAAATT ATCTTACCTG ATATCAACAA ATTACCAGTA
GATCCAATTA ACGATTTACC GGAAGGATAC CAAGACACAG AAGTGGAAGC AGATACCGAT
GTAATGGATA CCTGGGCTAC TAGTTCATTG TCCACTCAAT TCCATAATAT ATCTACAACT
CATGCTGACT TACGAGCTCA AAGTCATGAA ATCATAAGGT CTTGGGCATT TTATACTATT
CTACAGGCCT ATTACCATAA TAATGATATT CCATGGAAAA ACATTATGAT CAGCGGGTGG
TGCCTTGCAG AAGATAAAAC AAAGATGAGT AAATCAAAGG GAAATACACT AACTCCAAAT
AAATTGTTAG AAGAATATGG TGCAGATGTA GTACGTTATT GGGCTGCAAA CTCCAAATTA
GGAGCAGATA CCACATTTTC CAATGACGTT CTCAAATTAG GCAAAAGGTT TACTACTAAA
CTTTGGAATG CAAGTAAATT TGTTTCAATG TTTATTGGTC AATATTCAGA AATAGATTTA
CAACACGTAA CAGAAACAAT GGATAAGTGG ATACTTTCAA AACTATATAA AGTTATCATC
AAAGCAACAG AAAGTTTCAA TTCTTTTGAG TATTGTATAG CACTTAACTA CATAGAATCT
TTTTTCTGGA AAGATTTTTG CGATAACTAT CTTGAATTGT CTAAAAAAAG AGCATATGGA
GAATCTACAA GTAAACAGGA ACACTTAAGT GCAGTACACA CTCTATCCTT TATATTAAGA
GAGTTACTCA AAATGTTAGC ACCTTTTATG CCATATATCA CAGAAGAAAT ATACAATACA
CTTTATAACA ACAAAAATTC AATTCATAGC CACAATAACT GGCCTATTGC AAATATAAGT
CTATACAATG CATCAGATGA GCTATTAGGA GAAGATTTTA TAGAAATTCT TAACCAAGTA
CGTAAAATAA AAGCCAATGC CCAATTATCA GTAAAATATA AAATAGATAA GCTAATCATA
AATAGTCAAG GCTGTAACTT TCCTACTTCA CTAGAAAATG ACTTAAAAGC TGTCTGCAAT
GCTGAACATA TAGTGTACAC TACTCAACCA GTAATTGATA CAAATGAAGA AAAATTTCTA
GTTTCATTAG AATTCACTAA CCAGTAA
 
Protein sequence
MQSIFNNKYQ FKNIETKYNT HWNITKLYKW KNSGNNQFII DTPPPTISGQ LHIGHVFSYC 
HTDFIARYQR MLGKDVFYPI GFDDNGLPTE RLVEKTKKIR ATDMSRKEFN TICTQVSNEF
RIQFKQLFQS IGISYDWDLE YHTISKNIQK ISQTSFINLY NKGKLYRKLQ PIFWDCIDKT
AIARAEVEEN EISSFMNTIT FSTEAGIPIN IATTRPELMP ACVAVFFNPS DTRYQHLLGQ
NAIVPIFGNR VKILPDDQVK IDKGTGLVMC CTFGDEMDVY WWNKHNLDTK IIISKSGTIF
NLSSDTTQGK SVCNQLHGLP ITKARALILE ILDQNNLLKH KQEIIHNVKC AERSGAPIEI
LLSHQWFIKV VEIKQELLKQ VQKINWYPKS MRKQIEIWIE GLNWDWCISR QRYFGVPFPV
WYSKKADGEI ILPDINKLPV DPINDLPEGY QDTEVEADTD VMDTWATSSL STQFHNISTT
HADLRAQSHE IIRSWAFYTI LQAYYHNNDI PWKNIMISGW CLAEDKTKMS KSKGNTLTPN
KLLEEYGADV VRYWAANSKL GADTTFSNDV LKLGKRFTTK LWNASKFVSM FIGQYSEIDL
QHVTETMDKW ILSKLYKVII KATESFNSFE YCIALNYIES FFWKDFCDNY LELSKKRAYG
ESTSKQEHLS AVHTLSFILR ELLKMLAPFM PYITEEIYNT LYNNKNSIHS HNNWPIANIS
LYNASDELLG EDFIEILNQV RKIKANAQLS VKYKIDKLII NSQGCNFPTS LENDLKAVCN
AEHIVYTTQP VIDTNEEKFL VSLEFTNQ