| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH_0098 |
|---|
| Symbol | pdhC |
|---|
| ID | 3927745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia chaffeensis str. Arkansas |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007799 |
|---|
| Strand | + |
|---|
| Start bp | 87593 |
|---|
| End bp | 88843 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637901222 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
|---|
| Protein accession | YP_506926 |
|---|
| Protein GI | 88657701 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.66929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAG AAGTATTGAT GCCTGCTCTT TCTCCAACTA TGAAAAGTGG CACTATAAGA
AAGTGGTATA AAGCAGAAGG GGATGTAGTA AAATCAGGTG ATGTAATAGC TGATATAGAA
ACTGATAAAG CTGTTATGGA ATGTGAGTAT ACAGATGAAG ATGGTATCAT GGGTAAAATT
TTTTTTGCTG AAGGAAGCAA AAATATAGAG GTAAATCAAT TGATAGCATT GATTGCTGTA
GATGAACAGG ATTTAGCTAA AGTTCATTCA TATGAAAAAG GTGATAATGT TGTAAAAAAT
GAGTTAGTTG CGTTACAAGA TAGTCAACCT GCTCAAGATG AGTCAGTTGT ATTGCAAATG
AATCAACAAA TTGTGAATGC TAGCGAAGTA TTGGTTAATT CATCTAATTC TTCTGAAAGA
GTTAAGGTGA GTCCTTTAGC AAAAAAAATT GCTTCGAACC TTGGTGTTGA TGTAAATTTG
GTAAAAGGAA CAGGCCCGTA CGGTAGGATT ATAAAAGCTG ATATATTGGA TGTTATAAAT
CAGCATGGTC ACATTGCTAA CTCTCCTGAG GATGCTTCTT TTACTGAAAT TAGTAGTATG
CGTAGAGTAA TAGCAGAACG TTTAGTGTAT TCAAAACAAA CAATTCCTCA CTTTTACGTT
TCAATAGATT GTCTTGTGGA TAGTTTGTTA AAATTAAGGT TAGAAATAAA TGCTGAAAAT
CCTGATACTA AGGTTACAGT GAATGATTTC ATCATTAAAG CTGTTGCCAT GAGTATTAAG
AAATTTCCTG AAATTAATGT ATCTTGGTCT GATGATAAGA TAGTTGTATT TCCTAGTATT
GATATTTCTG TTGCTGTATC TATTGATAAT GGACTTATCA CACCAATTAT TTTTGGTGCA
GATAAGAAAT CTTTGTTAGA AATATCAAGA GAAGTGAAAG CATTAGCTAG TAAGGCTAAA
TCTGGAAAAT TGAAACCTGA AGAATTTCAA GGCGGAGGTT TTACTGTTTC TAATCTTGGT
ATGTTTGGTA TTAAAGAATT CTACGCAATT GTTAATCCTC CACAGTCTTG TATAATGTCT
GTTGGATGCT CTGAAAAACG AGCAATGGTT GTTAATGAGC AAATATGTAT TTCAAATGTT
GTGACAGTAA CATTATCTGT AGACCATAGA GTTATTGATG GTGTACTAGC GGCAAAATTT
TTAAATTGCT TTAAATCTTA TCTAGAGAAA CCATTTTTAA TGTTGATATA A
|
|---|
| Protein sequence | MPIEVLMPAL SPTMKSGTIR KWYKAEGDVV KSGDVIADIE TDKAVMECEY TDEDGIMGKI
FFAEGSKNIE VNQLIALIAV DEQDLAKVHS YEKGDNVVKN ELVALQDSQP AQDESVVLQM
NQQIVNASEV LVNSSNSSER VKVSPLAKKI ASNLGVDVNL VKGTGPYGRI IKADILDVIN
QHGHIANSPE DASFTEISSM RRVIAERLVY SKQTIPHFYV SIDCLVDSLL KLRLEINAEN
PDTKVTVNDF IIKAVAMSIK KFPEINVSWS DDKIVVFPSI DISVAVSIDN GLITPIIFGA
DKKSLLEISR EVKALASKAK SGKLKPEEFQ GGGFTVSNLG MFGIKEFYAI VNPPQSCIMS
VGCSEKRAMV VNEQICISNV VTVTLSVDHR VIDGVLAAKF LNCFKSYLEK PFLMLI
|
|---|
| |