Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0003 |
Symbol | trmD |
ID | 3927444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | + |
Start bp | 1516 |
End bp | 2223 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637901128 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_506838 |
Protein GI | 88658005 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACATTCA ACGTTAACGT TTTAACCATA TTTCCAGAAA TGTTTCCAGG AACATTAAGC CATTCAATAA TAGGTAGAGC CCTAAATAAA GGCCTTTGGA ACCTTAATGT TATCGATATA AGATCATTTG CAAAAGATAA ACATAAAACT GTAGATGACA GGCCTTACGG CGGTGGACCT GGAATGATAA TGAAAGCAGA TGTTATAGGC TCAGCAATAG ATGAAGTATT AAGTAAAAAC AAAAACACAA AACTAATATA CATGTCCCCC AGTGGAATAA AATTAAATCA AGATATTTCT GGACAATTAA CACATTTTTC TAATATAACT ATACTATGTG GTCGCTTTGA AGGAATAGAT AAGAGAATTT TAGATTTTTA TGATTTTCAT GAAATAAGTA TTGGAGATTA TATATTATCT GGTGGAGAAG TTGCTTGTAT GGTTCTCATA GAGACTTGTG TCAGGCTTAT ACCTGGGGTA GTTAGTAATA CACAAAGTAT ACGTGATGAA AGTTTTACCT TAGACTATAA GTTAGAATAC CCTCAGTACA CACGTCCAGC AAAATGGAGG GGATTAGAGG TCCCTGATGT TTTACTCTCT GGAAATCATA AAAAGATTAA CCTTTGGAAA GCCAATCAAT CTTACTGTAT AACCAAGCAA AGGCGTCCTG AATTGACTGG TACCATAGAT GGAGATATAT ATGAGTGA
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Protein sequence | MTFNVNVLTI FPEMFPGTLS HSIIGRALNK GLWNLNVIDI RSFAKDKHKT VDDRPYGGGP GMIMKADVIG SAIDEVLSKN KNTKLIYMSP SGIKLNQDIS GQLTHFSNIT ILCGRFEGID KRILDFYDFH EISIGDYILS GGEVACMVLI ETCVRLIPGV VSNTQSIRDE SFTLDYKLEY PQYTRPAKWR GLEVPDVLLS GNHKKINLWK ANQSYCITKQ RRPELTGTID GDIYE
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