| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0018 |
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| Symbol | |
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| ID | 6966441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011350 |
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| Strand | + |
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| Start bp | 713 |
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| End bp | 3709 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643383925 |
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| Product | RTX C- domain protein |
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| Protein accession | YP_002268404 |
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| Protein GI | 209395598 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAA ATAAAATAAA GAACATTTTC AATAATGCGA CATTGACTAC AAAATCAGCA
TTTAATACAG CATCATCAAG CGTACGTTCC GCTGGAAAAA AACTCATATT ATTAATACCT
GATAATTATG AAGCTCAGGG CGTGGGTATT AATGAGTTGG TCAAAGCTGC TGATGAGCTT
GGAATAGAAA TACACCGTAC TGAACGAGAT GATACAGCGA TTGCAAACCA GTTTTTTGGT
GCAGCAGAAA AAGTTGTAGG ATTAACTGAA CGTGGTGTTG CAATATTCGC ACCACAACTT
GACAAACTTC TGCAGAAGTA TCAGAAAGTT GGGAGTAAAA TAGGAGGAAC CGCTGAAAAT
GTAGGTAATA ATCTGGGAAA AGCCGGAACA GTTCTCTCAG CACTACAGAA TTTTACGGGG
ATTGCTTTAT CAGGCATGGC TCTTGATGAA TTGCTGAGAA AACAACGGGC AGGAGAGGAT
ATAAGTCAGA ATGATATTGC CAAAAGTAGT ATTGAACTTA TTAATCAGCT TGTAGATACA
GTATCAAGTA TAAACAGTAC CGTTGATTCA TTTTCTGAGC AGCTTAACCA GCTTGGCTCA
TTTTTATCCA GTAAACCTCG ATTAAGTTCT GTTGGTGGGA AATTACAAAA TTTACCAGAC
CTGGGCCCCC TGGGGGATGG GCTGGATGTT GTCTCCGGAA TTCTTTCTGC TGTATCAGCA
AGCTTTATTC TGGGAAACAG TGACGCACAT ACAGGAACAA AAGCTGCAGC GGGTATCGAA
CTGACAACTC AGGTTCTTGG AAATGTTGGT AAAGCTGTTT CGCAATATAT TCTGGCTCAG
AGAATGGCAC AGGGGTTATC GACAACAGCT GCAAGTGCGG GTCTGATCAC ATCGGCTGTT
ATGCTGGCTA TCAGTCCTCT TTCTTTCCTG GCTGCTGCAG ATAAATTTGA GCGAGCTAAG
CAGCTTGAAT CATATTCTGA ACGATTTAAA AAATTGAATT ATGAAGGGGA TGCTTTACTC
GCAGCCTTTC ATAAAGAAAC CGGAGCTATA GATGCAGCCC TGACAACAAT AAATACTGTC
CTGAGTTCTG TATCTGCGGG AGTTAGTGCA GCCTCCAGTG CATCCCTCAT AGGGGCCCCG
ATAAGCATGC TGGTGAGTGC ATTAACCGGT ACGATATCTG GCATTCTGGA AGCATCAAAA
CAGGCTATGT TTGAGCACGT TGCAGAGAAA TTCGCTGCTC GGATCAATGA ATGGGAAAAG
GAGCATGGCA AAAATTATTT TGAGAATGGA TATGACGCAA GACATGCTGC GTTTTTAGAA
GACTCTCTGT CTTTGCTTGC TGATTTTTCT CGTCAGCATG CAGTAGAAAG AGCAGTCGCA
ATAACCCAGC AACATTGGGA TGAGAAGATC GGTGAACTTG CAGGCATAAC CCGTAATGCT
GATCGCAGTC AGAGTGGTAA GGCATATATT AATTATCTGG AAAATGGAGG GCTTTTAGAG
GCTCAACCGA AGGAGTTTAC ACAACAAGTG TTTGATCCTC AAAAAGGGAC CATAGACCTT
TCAACAGGTA ATGTATCAAG TGTTTTGACA TTTATAACAC CAACATTTAC CCCAGGAGAA
GAAGTTAGAG AAAGAAAACA GAGTGGTAAA TATGAATATA TGACATCTCT TATTGTAAAT
GGTAAGGATA CATGGTCTGT AAAAGGCATA AAAAATCATA AAGGTGTATA TGATTATTCA
AAATTGATTC AGTTTGTTGA AAAGAATAAC AAACACTATC AGGCGAGAAT AATTTCTGAG
CTCGGAGATA AAGACGATGT GGTTTATTCT GGAGCAGGCT CATCAGAAGT ATTTGCTGGT
GAAGGTTATG ATACCGTATC TTATAATAAG ACGGATGTTG GTAAACTAAC AATTGATGCA
ACAGGAGCAT CAAAACCTGG TGAGTATATA GTTTCAAAAA ATATGTATGG TGACGTGAAG
GTATTGCAGG AAGTCGTTAA GGAACAGGAG GTGTCAGTAG GGAAGCGAAC AGAGAAAATA
CAATATCGTG ATTTTGAATT CAGAACCGGT GGAATTCCTT ATGATGTAAT AGATAATCTT
CATTCTGTTG AAGAGCTCAT TGGCGGAAAA CATGATGATG AATTCAAAGG CGGTAAGTTT
AATGATATAT TCCATGGCGC AGATGGGAAC GATTATATCG AAGGTAATTA TGGTAATGAT
CGACTATACG GCGATGATGG GGATGATTAT ATATCCGGAG GACAGGGAGA CGACCAGTTA
TTTGGTGGTA GTGGAAACGA TAAATTGAGT GGAGGGGATG GTAATAATTA TCTGACAGGA
GGAAGCGGTA ATGATGAGCT TCAGGCACAC GGAGCTTATA ATATTCTGTC AGGTGGTACT
GGTGATGATA AACTTTATGG TGGTGGTGGT ATTGATCTTC TGGATGGAGG GGAAGGTAAT
GACTATCTGA ATGGTGGTTT TGGTAATGAT ATTTATGTTT ATGGGCAAAA CTATGGTCAT
CATACAATTG CAGATGAAGG AGGTAAAGGA GATCGTTTGC ACTTATCTGA TATTAGCTTT
GATGATATCG CATTTAAGAG AGTTGGAAAT GATCTTATCA TGAATAAAGC CATTAATGGT
GTACTTTCAT TTAATGAGTC AAATGATGTC AATGGGATAA CATTTAAAAA CTGGTTTGCG
AAAGATGCCT CAGGAGCAGA TAATCATCTT GTTGAGGTTA TAACAGATAA AGATGGTCGA
GAGATAAAAG TTGATAAGAT ACCTCATAAT AATAATGAAC GGTCAGGTTA TATAAAAGCC
AGTAATATAG CATCTGAAAA AAACATGGTT AATATCACCA GTGTTGCCAA TGATATTAAT
AAGATTATTT CTTCAGTTTC AGGGTTCGAT TCAGGTGATG AACGATTAGC ATCTTTATAT
AATTTATCCT TACATCAAAA CAACACACAC TCAACAACTT TAACGACAAC TGTCTGA
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| Protein sequence | MTVNKIKNIF NNATLTTKSA FNTASSSVRS AGKKLILLIP DNYEAQGVGI NELVKAADEL
GIEIHRTERD DTAIANQFFG AAEKVVGLTE RGVAIFAPQL DKLLQKYQKV GSKIGGTAEN
VGNNLGKAGT VLSALQNFTG IALSGMALDE LLRKQRAGED ISQNDIAKSS IELINQLVDT
VSSINSTVDS FSEQLNQLGS FLSSKPRLSS VGGKLQNLPD LGPLGDGLDV VSGILSAVSA
SFILGNSDAH TGTKAAAGIE LTTQVLGNVG KAVSQYILAQ RMAQGLSTTA ASAGLITSAV
MLAISPLSFL AAADKFERAK QLESYSERFK KLNYEGDALL AAFHKETGAI DAALTTINTV
LSSVSAGVSA ASSASLIGAP ISMLVSALTG TISGILEASK QAMFEHVAEK FAARINEWEK
EHGKNYFENG YDARHAAFLE DSLSLLADFS RQHAVERAVA ITQQHWDEKI GELAGITRNA
DRSQSGKAYI NYLENGGLLE AQPKEFTQQV FDPQKGTIDL STGNVSSVLT FITPTFTPGE
EVRERKQSGK YEYMTSLIVN GKDTWSVKGI KNHKGVYDYS KLIQFVEKNN KHYQARIISE
LGDKDDVVYS GAGSSEVFAG EGYDTVSYNK TDVGKLTIDA TGASKPGEYI VSKNMYGDVK
VLQEVVKEQE VSVGKRTEKI QYRDFEFRTG GIPYDVIDNL HSVEELIGGK HDDEFKGGKF
NDIFHGADGN DYIEGNYGND RLYGDDGDDY ISGGQGDDQL FGGSGNDKLS GGDGNNYLTG
GSGNDELQAH GAYNILSGGT GDDKLYGGGG IDLLDGGEGN DYLNGGFGND IYVYGQNYGH
HTIADEGGKG DRLHLSDISF DDIAFKRVGN DLIMNKAING VLSFNESNDV NGITFKNWFA
KDASGADNHL VEVITDKDGR EIKVDKIPHN NNERSGYIKA SNIASEKNMV NITSVANDIN
KIISSVSGFD SGDERLASLY NLSLHQNNTH STTLTTTV
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