Gene ECH74115_B0006 details

Gene Information

• Locus tag: ECH74115_B0006
• Symbol: gspG
• ID: 6966463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli O157:H7 str. EC4115
• Kingdom: Bacteria
• Replicon accession: NC_011350
• Strand: +
• Start bp: 86938
• End bp: 87372
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 643384022
• Product: general secretion pathway protein G
• Protein accession: YP_002268501
• Protein GI: 209395575
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.0815216
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGAAAAC AGCATCAGCG TGGTTTTACC TTGCTGGAAA TAATGGTGGT AATTGTGATC 
TTGGGAGTTT TGGCCAGTCT GGTGGTCCCG AATCTGATGG GAAATAAGGA TAAGGCCGAT 
CGGCAGAAAG TGATGAGCGA CTTGGTTGCG CTGGAAAGCA CGCTCGATAT GTACCGGTTA 
GATAATAACC GGTATCCGAC AACGGAGCAG GGACTGCGGG CACTGGTCAG TAAACCCACC 
GTGCAACCTG AACCCCGTAA CTACCGGCAG GATGGTTATA TCCGCCGTTT GCCCCAGGAT 
CCTTGGGGGG GGGATTATCA GCTGTTAAAT CCTGGTCAGT ACAGCGACAT TGATATCTTT 
TCTCCTGGCC CGGATGGTGT GCCAAACACT GAAGATGATA TTGGTAACTG GACGCTCGGT 
AACGCGCAGC CATGA 

 

Protein sequence

MRKQHQRGFT LLEIMVVIVI LGVLASLVVP NLMGNKDKAD RQKVMSDLVA LESTLDMYRL 
DNNRYPTTEQ GLRALVSKPT VQPEPRNYRQ DGYIRRLPQD PWGGDYQLLN PGQYSDIDIF 
SPGPDGVPNT EDDIGNWTLG NAQP