| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_B0004 |
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| Symbol | gspE |
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| ID | 6966471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011350 |
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| Strand | + |
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| Start bp | 84177 |
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| End bp | 85682 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643384020 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_002268499 |
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| Protein GI | 209395608 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0631782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAG TAGTACAGAA TGTCAGTGAA TCACGTCCCC TTCTGCCTTT TTCCTTTTCC
CGTACGCAGA GAATTTTGTT GCTGCGTGAA CAGGAGGGGA ATCGAGTGTT CTGCATGGAG
GACACACCTG CCAGTGCCCT GTTGGAGGTG CGCAGGGTGG CTGAAGGTCC TCTGAATGTC
ACAACAGTGT CGGCGGAAGC GTTTGAAAAA CAGCTGGTGA GCAGCTATCA ACGTGATTCT
GATGAAGCGC GACAAATGAT GGCTGAGATT GGTAATGAAA TGGATTTTTA TACCGTCGCA
GGGGAGTTGC CTGACCGTGA GGACTTACTG GATGCGAATG ACGATGCGCC AATTATCCGC
CTGATTAACG CAATGCTGAC AGAGGCAATT AAAGAGAAAG CCTCAGATAT TCATATTGAA
ACTTACGAAC GCCATCTGCA GGTTCGCTTT CGCATTGATG GCGTTCTGCG GGAGATCCTC
CGTTTACATA GGAATCTGGC TTCGTTACTG ATTTCACGCA TTAAAGTCAT GGCCCGGTTG
GATATTGCCG AAAAACGCGT TCCCCAAGAT GGCCGCATGG TACTGCGTAT CGGTGGTCGG
GCGGTGGATG TGCGTGTTTC AACGTTGCCT TCAAATCATG GTGAACGCAT CGTGCTGCGT
TTACTAGACA AAAATAGCGT TAGTCTCGAT CTTGCTGCAC TCGGCATGTC GCAGCAGAAT
CAGCGACACA TTGATGCACT GATCCGCCGT CCTCACGGCA TTATTTTGGT GACCGGGCCT
ACAGGGTCGG GTAAAAGCAC GACGCTTTAT GCCGCGTTAA GCCTGCTGAA TCCCCGAGAC
CGCAACATTA TGACGGTCGA GGATCCTGTT GAATATGAAC TGGACGGTAT CAGTCAGACC
CAGGTCAACC CGAAGGTGGA CATGACCTTT GCCCGGAGTC TGCGCGCTAT TTTACGTCAG
GATCCGGACG TGGTGCTTGT GGGGGAGATC CGTGACGGTG AAACAGCCCA GATTGCTGTG
CAGGCCTCGC TGACAGGGCA TTTGGTGCTG TCAACGTTAC ATACGAATAG TGCAGCAGGC
GCGCTGTCGC GTCTGCAGGA TATGGGCATC CCTCCTTTTC TGCTTTCCAC CTCATTACTG
GCTGTTCTGG CCCAGCGACT GGTTCGCACG TTGTGTCCGC GCTGTCGTCA GCCCTGTCAG
GTCAGTACTG AGTTAGCGAT GGACATGGAC ATTCCCCCTG AAACCACGAT CTGGCAGCCT
GCCGGGTGTC AGCACTGCAG TTTCACGGGC TATCACGGGC GCACCGGGAT CCACGAGCTG
TTGCTGATTG ACGATCGCAT TCGGACGGCA ATCTATCAGG GGGAGGGGGA GCTGGGTATT
ACCCGCTTGG CAGGGAGTCG CTATCTGACG CTGCGTGGCG ACGGGCGACA AAAGGTACTA
GCCGGTGAGA CCAGTTGGGA GGAGGTGGTT CGCGTTACTG AAAGCAGATT GCAGGAAGAG
GAATGA
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| Protein sequence | MSRVVQNVSE SRPLLPFSFS RTQRILLLRE QEGNRVFCME DTPASALLEV RRVAEGPLNV
TTVSAEAFEK QLVSSYQRDS DEARQMMAEI GNEMDFYTVA GELPDREDLL DANDDAPIIR
LINAMLTEAI KEKASDIHIE TYERHLQVRF RIDGVLREIL RLHRNLASLL ISRIKVMARL
DIAEKRVPQD GRMVLRIGGR AVDVRVSTLP SNHGERIVLR LLDKNSVSLD LAALGMSQQN
QRHIDALIRR PHGIILVTGP TGSGKSTTLY AALSLLNPRD RNIMTVEDPV EYELDGISQT
QVNPKVDMTF ARSLRAILRQ DPDVVLVGEI RDGETAQIAV QASLTGHLVL STLHTNSAAG
ALSRLQDMGI PPFLLSTSLL AVLAQRLVRT LCPRCRQPCQ VSTELAMDMD IPPETTIWQP
AGCQHCSFTG YHGRTGIHEL LLIDDRIRTA IYQGEGELGI TRLAGSRYLT LRGDGRQKVL
AGETSWEEVV RVTESRLQEE E
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