Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_A0031 |
Symbol | |
ID | 6966507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011351 |
Strand | + |
Start bp | 23185 |
End bp | 24000 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643384061 |
Product | resolvase |
Protein accession | YP_002268540 |
Protein GI | 209395650 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000452405 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTCACT TACCCGCCAA AATTTTCCAG ATTTCACGTA GCGACGCCTG GAATTTAACC ATCTCTCCCG ATGCAGCCCG TAATATGCGG GATCTGGCGG CGCAGATTGG CGCAGGAATG CCAAAATATC TGATAGCACC GGAAGTCTCA CTGCTTCTCT CCTACATTGA TGATCTGAGC ATCCGCATGT ACTTTGAGAC ACTCTGGAAT ACCGGAGCAC GACTGAATGA AGCTCTGGCG CTGAAACCTG CTGATTTTAT GCTGACTCCG ACGCGCCAGT ACCCGCAACC CGTAGTGATC CTGAAAACAC TCAAGCAACG TATAAAAGAA GCAGAAAGAA GACCAGGACG CCCGACCACC AGGCATCCAC CATTACACCC TGATCCGCGA TACAGGAAAC CACCGGAGCC TGCTGTAAGG CTGGTTCCTG TTCTGGATGC CGGATACGCA TTGCGTATGC GGGAATACCT GGCGACCTGG AAAAAGCGGA TCAAACATCA GCCAGTGTGG GACATAACAT CGAGACAGAC ACCGCTGAAC TGGATAAACA CCGCAGTGGC ACGGGCAGGG CGTGACGGCG TAACATTTTC GGTTCCGGTC ACGCCTCACA CGTTTCGCCA CAGTTACGCC ATGCACCTGA CAATGAGTGG CGTTCCTCCG CGCGTCCTGC AATCCCTGCT GGGACACCGT TATGCAAGAA GCACCGAGAT TTACACCCGC GTTTTTTCGC TGGACGTCCT TACAGGAAGT GGCCTGTCCT TTACCTGCGA TCCACAGCTT GCAAAACAGC TTCTTGGATA CCCTGATGTG CCTTAA
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Protein sequence | MSHLPAKIFQ ISRSDAWNLT ISPDAARNMR DLAAQIGAGM PKYLIAPEVS LLLSYIDDLS IRMYFETLWN TGARLNEALA LKPADFMLTP TRQYPQPVVI LKTLKQRIKE AERRPGRPTT RHPPLHPDPR YRKPPEPAVR LVPVLDAGYA LRMREYLATW KKRIKHQPVW DITSRQTPLN WINTAVARAG RDGVTFSVPV TPHTFRHSYA MHLTMSGVPP RVLQSLLGHR YARSTEIYTR VFSLDVLTGS GLSFTCDPQL AKQLLGYPDV P
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