Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5878 |
Symbol | |
ID | 6972229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5535461 |
End bp | 5536186 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643389495 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002273887 |
Protein GI | 209399682 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0180524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCAG GATGCTGCAA AAATGGAATT GTTATCAGTA AAATACCTGT TATGCAAGCA GGGTTAAAAG AGGTCATGAG GACTCACTTC CCTGAATATG AAATAATATC CAGCGCCTCT GCGGAGGACC TTACCTTATT ACAATTACGT CGTTCCGGAT TAGTCATTGC TGATTTAGCC GGTGAAAGTG AAGATCCACG TTCTGTTTGT GAACATTATT ATTCTTTAAT CTCACAATAT CGGGAAATTC ACTGGGTTTT CATGGTGTCA CGCTCTTGGT ATTCCCAGGC TGTAGAACTG CTCATGTGCC CTACGGCGAC GTTATTGTCT GATGTTGAAC CCATTGAGAA TCTGGTCAAG ACCGTACGTT CCGGCAATAC GCACGCAGAG CGTATCAGCG CCATGCTGAC CTCTCCGGCA ATGACTGAAA CTCATGATTT TAGCTATCGC TCCGTCATTC TCACTCTTTC AGAGCGCAAG GTACTGCGGC TATTAGGTAA AGGATGGGGC ATCAACCAGA TAGCTTCATT GCTTAAGAAA AGTAATAAAA CTATCAGCGC CCAAAAAAAC AGTGCGATGC GTCGACTGGC AATTCACAGC AACGCTGAAA TGTATGCATG GATAAATAGC GCGCAGGGTG CAAGAGAACT TAACTTGCCT TCTGTTTATG GAGATGCCGC AGAATGGAAC ACAGCCGAAT TAAGAAGAGA AATGTCGCAC TCATAG
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Protein sequence | MLPGCCKNGI VISKIPVMQA GLKEVMRTHF PEYEIISSAS AEDLTLLQLR RSGLVIADLA GESEDPRSVC EHYYSLISQY REIHWVFMVS RSWYSQAVEL LMCPTATLLS DVEPIENLVK TVRSGNTHAE RISAMLTSPA MTETHDFSYR SVILTLSERK VLRLLGKGWG INQIASLLKK SNKTISAQKN SAMRRLAIHS NAEMYAWINS AQGARELNLP SVYGDAAEWN TAELRREMSH S
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