Gene ECH74115_5821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5821 
Symbol 
ID6966892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5472309 
End bp5472806 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content51% 
IMG OID643389448 
Producttype-1 fimbrial protein homolog 
Protein accessionYP_002273840 
Protein GI209396777 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCTC TGGCCGGAAA TAAATGGAAT ACCACGCCGC CCGGCGGAAA TATGCAATTT 
CAGGGCGTCA TTATTGCGGA AACTTGCCTG ATTGAAGCCG GTGATAAACA AATGACGGTC
AATATGGGGC AAATCAGCAG TAACCGGTTT CATGCGGTAG GGGAAGATAG CGCACCGGTG
CCTTTTGTTA TTCATTTACG GGAATGTAGC ACGGTGGTGA GTGAACGTGT GGGTGTGGCG
TTTCACGGTG TCGCGGATGG TAAAAATCCG GATGTGCTTT CCGTGGGAGA GGGGCCAGGG
ATAGCCACCA ATATTGGCGT AGCGTTGTTT GATGATGAAG GAAACCTCGT ACCGATTAAT
CGTCCTCCAG CAAACTGGAA ACGGCTTTAC TCAGGCTCTA CTTCGCTACA TTTCATCGCC
AAATATCGTG CTACCGGGCG TCGGGTTACT GGCGGCATCG CCAATGCACA GGCCTGGTTC
TCTTTAACCT ATCAGTAA
 
Protein sequence
MFALAGNKWN TTPPGGNMQF QGVIIAETCL IEAGDKQMTV NMGQISSNRF HAVGEDSAPV 
PFVIHLRECS TVVSERVGVA FHGVADGKNP DVLSVGEGPG IATNIGVALF DDEGNLVPIN
RPPANWKRLY SGSTSLHFIA KYRATGRRVT GGIANAQAWF SLTYQ