Gene ECH74115_5820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5820 
Symbol 
ID6969658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5471654 
End bp5472202 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content52% 
IMG OID643389447 
Producttype-1 fimbrial protein homolog 
Protein accessionYP_002273839 
Protein GI209396019 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AAACTCTGGC AATCGTTGTT CTGTCGGCTC TGTCCCTCAG TTCTACAGCG 
GCTCTGGCCG CTGCCACGAC GGTTAATGGT GGGACCGTTC ACTTTAAAGG GGAAGTTGTT
AACGCCGCTT GCGCAGTTGA TGCAGGCTCT GTTGATCAAA CCGTTCAGTT AGGACAGGTT
CGTACCGCAT CGCTGGCACA GGACGGAGCA ACCAGTTCTG CTGTCGGTTT TAACATTCAG
CTGAATGATT GCGATACCAA TGTTGCATCT AAAGCCGCTG TTGCCTTTTT AGGTACGGCG
ATTGATGCGG GTCATACCAA CGTTCTGGCT CTGCAGAGTT CAGCTGCGGG TAGCGCAACA
AACGTTGGTG TGCAGATCCT GGACAGAACG GGTGCTGCGC TGACGCTGGA TGGTGCGACA
TTCAGTGAGC AAACAACCCT GAATAACGGT ACTAACACCA TTCCGTTCCA GGCGCGTTAT
TATGCAATCG GCGAGGCAAC CCCGGGTGCT GCTAATGCGG ATGCGACCTT CAAGGTTCAG
TATCAATAA
 
Protein sequence
MKIKTLAIVV LSALSLSSTA ALAAATTVNG GTVHFKGEVV NAACAVDAGS VDQTVQLGQV 
RTASLAQDGA TSSAVGFNIQ LNDCDTNVAS KAAVAFLGTA IDAGHTNVLA LQSSAAGSAT
NVGVQILDRT GAALTLDGAT FSEQTTLNNG TNTIPFQARY YAIGEATPGA ANADATFKVQ
YQ