Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5820 |
Symbol | |
ID | 6969658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5471654 |
End bp | 5472202 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643389447 |
Product | type-1 fimbrial protein homolog |
Protein accession | YP_002273839 |
Protein GI | 209396019 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTA AAACTCTGGC AATCGTTGTT CTGTCGGCTC TGTCCCTCAG TTCTACAGCG GCTCTGGCCG CTGCCACGAC GGTTAATGGT GGGACCGTTC ACTTTAAAGG GGAAGTTGTT AACGCCGCTT GCGCAGTTGA TGCAGGCTCT GTTGATCAAA CCGTTCAGTT AGGACAGGTT CGTACCGCAT CGCTGGCACA GGACGGAGCA ACCAGTTCTG CTGTCGGTTT TAACATTCAG CTGAATGATT GCGATACCAA TGTTGCATCT AAAGCCGCTG TTGCCTTTTT AGGTACGGCG ATTGATGCGG GTCATACCAA CGTTCTGGCT CTGCAGAGTT CAGCTGCGGG TAGCGCAACA AACGTTGGTG TGCAGATCCT GGACAGAACG GGTGCTGCGC TGACGCTGGA TGGTGCGACA TTCAGTGAGC AAACAACCCT GAATAACGGT ACTAACACCA TTCCGTTCCA GGCGCGTTAT TATGCAATCG GCGAGGCAAC CCCGGGTGCT GCTAATGCGG ATGCGACCTT CAAGGTTCAG TATCAATAA
|
Protein sequence | MKIKTLAIVV LSALSLSSTA ALAAATTVNG GTVHFKGEVV NAACAVDAGS VDQTVQLGQV RTASLAQDGA TSSAVGFNIQ LNDCDTNVAS KAAVAFLGTA IDAGHTNVLA LQSSAAGSAT NVGVQILDRT GAALTLDGAT FSEQTTLNNG TNTIPFQARY YAIGEATPGA ANADATFKVQ YQ
|
| |