Gene ECH74115_5778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5778 
Symbol 
ID6967585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5410248 
End bp5411471 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content37% 
IMG OID643389408 
Producthypothetical protein 
Protein accessionYP_002273801 
Protein GI209399763 
COG category[S] Function unknown 
COG ID[COG4269] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT TAATTCAGGG AATTTTTATG GCTCAAGTTA TTAATGAAAT GGATGTTCCG 
TCCCATTCGT TTGTTTTTCA TGGTACAGGT GAGAGATATT TTCTTATTTG TGTGGTGAAT
GTGTTGTTAA CGATTATAAC GCTAGGTATC TATTTACCAT GGGCATTAAT GAAATGTAAG
CGTTATCTCT ATGCTAATAT GGAAGTTAAC GGACAACGAT TTTCTTATGG AATTACTGGT
GGGAATGTTT TTTTTAGTTG TCTTGTTTTT GTTTTTTTCT ATTTCGCAAT CTTAATGACA
GTGTCAGCAG ATATGCCGCT TATTGGCTGT GTTTTGACTT TGTCACTGTT GGTTTTGCTT
ATATTTATGG CAGCAAAAGG ACTGCGTTAT CAGGCCTTGA TGACCAGTCT CAACGGCGTA
AGATTTAGTT TTAATTGCTC TATGAAAGGG GTCTGGTGGG TAACCTTTTT CTTGCCGATT
TTAATGGCCA TTGGGATGGG GACTGTTTTC TTTATCTCGA CAAAGATGCT ACATGCCAAT
AGTTCAAGTA GTGTTATTGT ATCTGTGGTT CTGATGGCAA TAGTTGGTAT TGTTTCCATT
GGTATTTTTA ATGGTACTTT ATATAGCCTG GTAATGAGTT TTCTCTGGAG CAATACCAGT
TTCGGTATAC ATCGTTTCAA GGTGAAATTA GATACTGCGT ATTGTATAAA ATATGCCATC
CTCGCATTTT TAGCTTTATT ACCTTTTCTC GCTGTTGCTG GTTATATTAT CTTCGATCAA
ATATTAAATG CGTATGATAG TTCTGTGTAT GCAAATGATG ATATTGAGAA TTTACAGCAA
TTTATGGAAA TGCAACGTAA AATGATAATC GCGCAGTTAA TCTATTATTT TGGGATTGCT
GTTAGCACCA GTTATTTAAC GGTGTCGTTG CGAAATCATT TTATGAGCAA CCTGTCACTG
AATGATGGGC GTATTCGTTT TCGCTCAACT TTAACATACC ACGGTATGCT TTATCGCATG
TGTGCGTTGG TGGTGATATC CGGGATTACG GGCGGTCTGG CTTATCCACT GCTGAAAATA
TGGATGATTG ACTGGCAGGC AAAAAATACG TATTTGCTGG GCGATTTGGA TGACCTTCCT
TTAATCAATA AAGAAGAACA ACCAGATAAA GGCTTCTTAG CCAGTATTTC ACGGGGAATT
ATGCCTTCTT TACCATTTCT GTAA
 
Protein sequence
MDFLIQGIFM AQVINEMDVP SHSFVFHGTG ERYFLICVVN VLLTIITLGI YLPWALMKCK 
RYLYANMEVN GQRFSYGITG GNVFFSCLVF VFFYFAILMT VSADMPLIGC VLTLSLLVLL
IFMAAKGLRY QALMTSLNGV RFSFNCSMKG VWWVTFFLPI LMAIGMGTVF FISTKMLHAN
SSSSVIVSVV LMAIVGIVSI GIFNGTLYSL VMSFLWSNTS FGIHRFKVKL DTAYCIKYAI
LAFLALLPFL AVAGYIIFDQ ILNAYDSSVY ANDDIENLQQ FMEMQRKMII AQLIYYFGIA
VSTSYLTVSL RNHFMSNLSL NDGRIRFRST LTYHGMLYRM CALVVISGIT GGLAYPLLKI
WMIDWQAKNT YLLGDLDDLP LINKEEQPDK GFLASISRGI MPSLPFL