| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5685 |
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| Symbol | amiB |
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| ID | 6971360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5324990 |
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| End bp | 5326327 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643389318 |
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| Product | N-acetylmuramoyl-l-alanine amidase II |
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| Protein accession | YP_002273711 |
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| Protein GI | 209396446 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00261792 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTATC GCATCAGAAA TTGGTTGGTA GCGACGTTGC TGCTGCTGTG CGCGCAGGTG
GGTGCCGCGA CGCTCTCTGA TATTCAGGTT TCTAACGGCA ACCAACAGGC GCGGATAACG
TTGAGTTTTA TTGGCGATCC TGATTATGCG TTTAGCCATC AAAGCAAACG CACCGTGGCG
CTCGATATCA AACAAACGGG CGTGATTCAG GGACTGCCGT TGTTGTTCAG CGGTAATAAT
CTGGTGAAGG CGATTCGCTC CGGAACGCCT AAAGATGCAC AAACGCTACG GCTGGTGGTC
GATCTTACCG AAAATGGTAA AACCGAAGCG GTGAAGCGGC AGAATGGCAG CAATTACACT
GTCGTCTTTA CGATTAACGC CGATGCGCCG CCACCGCCTC CTCCGCCGCC TGTGGTTGTG
AAACGCGTTG AAACGCCTAC GGTTGTCGCA CCGCGCGTCA GCGAACCGGC GCGCAATCCG
TTTAAAACGG AAAGTAACCG CACTACGGGT GTTATCAGCA GTAATACGGT AACGCGTCCG
GCAGCGCGCG CGACGGCTAA CAATGGCGAT AAAATTATCA TCGCTATTGA TGCCGGACAC
GGCGGTCAGG ACCCTGGCGC TATCGGCCCC GGTGGTACGC GGGAGAAAAA TGTCACCATC
GCCATCGCGC GTAAATTGCG TACTTTGCTC AATGACGATC CGATGTTTAA AGGCGTTTTA
ACCCGTGACG GGGATTACTT TATCTCGGTG ATGGGGCGCA GCGATGTGGC ACGTAAGCAA
AACGCCAATT TCCTCGTGTC GATTCACGCT GATGCCGCAC CGAACCGCAG TGCGACTGGC
GCTTCCGTAT GGGTGCTCTC TAACCGTCGC GCCAACAGCG AAATGGCCAG CTGGCTGGAG
CAGCACGAGA AACAGTCGGA GCTGCTGGGC GGGGCGGGTG ATGTGCTGGC GAACAGTCAG
TCTGACCCCT ATTTAAGCCA GGCGGTGCTG GATTTACAGT TCGGTCATTC CCAGCGGGTA
GGGTATGATG TAGCGACCAG TATGATCAGT CAGTTGCAAC GCATTGGCGA AATACATAAA
CGTCGACCAG AACACGCCAG CCTTGGCGTT CTGCGCTCGC CGGATATCCC ATCAGTACTG
GTCGAAACCG GTTTTATCAG CAACAACAGC GAAGAACGTT TGCTGGCGAG CGACGATTAC
CAACAACAGC TGGCAGAAGC CATTTACAAA GGCCTGCGCA ATTATTTCCT TGCGCATCCG
ATGCAATCTG CGCCGCAGGG TGCAACGGCA CAAACTGCCA GTACGGTGAC GACGCCAGAT
CGCACGCTGC CAAACTAA
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| Protein sequence | MMYRIRNWLV ATLLLLCAQV GAATLSDIQV SNGNQQARIT LSFIGDPDYA FSHQSKRTVA
LDIKQTGVIQ GLPLLFSGNN LVKAIRSGTP KDAQTLRLVV DLTENGKTEA VKRQNGSNYT
VVFTINADAP PPPPPPPVVV KRVETPTVVA PRVSEPARNP FKTESNRTTG VISSNTVTRP
AARATANNGD KIIIAIDAGH GGQDPGAIGP GGTREKNVTI AIARKLRTLL NDDPMFKGVL
TRDGDYFISV MGRSDVARKQ NANFLVSIHA DAAPNRSATG ASVWVLSNRR ANSEMASWLE
QHEKQSELLG GAGDVLANSQ SDPYLSQAVL DLQFGHSQRV GYDVATSMIS QLQRIGEIHK
RRPEHASLGV LRSPDIPSVL VETGFISNNS EERLLASDDY QQQLAEAIYK GLRNYFLAHP
MQSAPQGATA QTASTVTTPD RTLPN
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