Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5685 |
Symbol | amiB |
ID | 6971360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5324990 |
End bp | 5326327 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643389318 |
Product | N-acetylmuramoyl-l-alanine amidase II |
Protein accession | YP_002273711 |
Protein GI | 209396446 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00261792 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTATC GCATCAGAAA TTGGTTGGTA GCGACGTTGC TGCTGCTGTG CGCGCAGGTG GGTGCCGCGA CGCTCTCTGA TATTCAGGTT TCTAACGGCA ACCAACAGGC GCGGATAACG TTGAGTTTTA TTGGCGATCC TGATTATGCG TTTAGCCATC AAAGCAAACG CACCGTGGCG CTCGATATCA AACAAACGGG CGTGATTCAG GGACTGCCGT TGTTGTTCAG CGGTAATAAT CTGGTGAAGG CGATTCGCTC CGGAACGCCT AAAGATGCAC AAACGCTACG GCTGGTGGTC GATCTTACCG AAAATGGTAA AACCGAAGCG GTGAAGCGGC AGAATGGCAG CAATTACACT GTCGTCTTTA CGATTAACGC CGATGCGCCG CCACCGCCTC CTCCGCCGCC TGTGGTTGTG AAACGCGTTG AAACGCCTAC GGTTGTCGCA CCGCGCGTCA GCGAACCGGC GCGCAATCCG TTTAAAACGG AAAGTAACCG CACTACGGGT GTTATCAGCA GTAATACGGT AACGCGTCCG GCAGCGCGCG CGACGGCTAA CAATGGCGAT AAAATTATCA TCGCTATTGA TGCCGGACAC GGCGGTCAGG ACCCTGGCGC TATCGGCCCC GGTGGTACGC GGGAGAAAAA TGTCACCATC GCCATCGCGC GTAAATTGCG TACTTTGCTC AATGACGATC CGATGTTTAA AGGCGTTTTA ACCCGTGACG GGGATTACTT TATCTCGGTG ATGGGGCGCA GCGATGTGGC ACGTAAGCAA AACGCCAATT TCCTCGTGTC GATTCACGCT GATGCCGCAC CGAACCGCAG TGCGACTGGC GCTTCCGTAT GGGTGCTCTC TAACCGTCGC GCCAACAGCG AAATGGCCAG CTGGCTGGAG CAGCACGAGA AACAGTCGGA GCTGCTGGGC GGGGCGGGTG ATGTGCTGGC GAACAGTCAG TCTGACCCCT ATTTAAGCCA GGCGGTGCTG GATTTACAGT TCGGTCATTC CCAGCGGGTA GGGTATGATG TAGCGACCAG TATGATCAGT CAGTTGCAAC GCATTGGCGA AATACATAAA CGTCGACCAG AACACGCCAG CCTTGGCGTT CTGCGCTCGC CGGATATCCC ATCAGTACTG GTCGAAACCG GTTTTATCAG CAACAACAGC GAAGAACGTT TGCTGGCGAG CGACGATTAC CAACAACAGC TGGCAGAAGC CATTTACAAA GGCCTGCGCA ATTATTTCCT TGCGCATCCG ATGCAATCTG CGCCGCAGGG TGCAACGGCA CAAACTGCCA GTACGGTGAC GACGCCAGAT CGCACGCTGC CAAACTAA
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Protein sequence | MMYRIRNWLV ATLLLLCAQV GAATLSDIQV SNGNQQARIT LSFIGDPDYA FSHQSKRTVA LDIKQTGVIQ GLPLLFSGNN LVKAIRSGTP KDAQTLRLVV DLTENGKTEA VKRQNGSNYT VVFTINADAP PPPPPPPVVV KRVETPTVVA PRVSEPARNP FKTESNRTTG VISSNTVTRP AARATANNGD KIIIAIDAGH GGQDPGAIGP GGTREKNVTI AIARKLRTLL NDDPMFKGVL TRDGDYFISV MGRSDVARKQ NANFLVSIHA DAAPNRSATG ASVWVLSNRR ANSEMASWLE QHEKQSELLG GAGDVLANSQ SDPYLSQAVL DLQFGHSQRV GYDVATSMIS QLQRIGEIHK RRPEHASLGV LRSPDIPSVL VETGFISNNS EERLLASDDY QQQLAEAIYK GLRNYFLAHP MQSAPQGATA QTASTVTTPD RTLPN
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