| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5675 |
|---|
| Symbol | |
|---|
| ID | 6967429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 5314972 |
|---|
| End bp | 5318295 |
|---|
| Gene Length | 3324 bp |
|---|
| Protein Length | 1107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643389308 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002273704 |
|---|
| Protein GI | 209400410 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00234961 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.548719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTGA TTATCACTTT TCTGATGGCC TGGTGCCTCA GTTGGGGGGC GTACGCCGCG
ACGGCCCCCG ATAGCAAACA AATCACCCAG GAACTGGAGC AGGCAAAAGC GGCGAAACCC
GCGCAGCCAG AAGTCGTAGA GGCACTCCAG TCTGCCTTAA ATGCGCTTGA GGAACGAAAA
GGTTCCCTTG AGCGCATCAA GCAATATCAA GAAGTCATTG ATAATTATCC GAAACTCTCC
GCTACTCTGC GCGCACAATT AAACAACATG CGTGACGAGC CGCGCAGCGT GTCGCCGGGG
ATGTCTACCG ACGCGCTGAA TCAGGAAATT CTCCAGGTCA GCAGTCAGTT GCTGGATAAA
AGCCGTCAGG CCCAGCAAGA GCAGGAGCGC GCCCGCGAGA TTGCCGATTC GCTGAATCAA
CTGCCGCAAC AGCAAACCGA CGCCCGCCGT CAGTTAAATG AGATCGAGCG CCGCCTGGGG
ACGCTTACCG GCAATACTCC GCTCAATCAG GCACAAAATT TCGCGTTGCA GTCTGACTCT
GCACGTCTTA AGGCGCTCGT TGATGAACTG GAGCTGGCGC AGCTGTCTGC CAATAACCGC
CAGGAATTAG CGCGCTTGCG CTCTGAGCTG GCTGAAAAAG AGAGCCAGCA ACTGGATGCG
TATTTGCAGG CCTTGCGTAA TCAATTGAAC AGCCAACGCC AGCTTGAGGC AGAGCGGGCG
CTGGAAAGTA CCGAATTACT AGCAGAAAAC AGTGCCGATT TGCCGAAAGA TATCGTCGCG
CAATTCAAAA TTAACCGCGA ACTATCGGCG GCGCTGAATC AACAGGCGCA GCGGATGGAT
CTCGTTGCCT CGCAACAGCG TCAGGCTGCC AGCCAGACGT TACAGGTCCG GCAGGCGTTG
AATACGCTGC GTGAACAGTC GCAATGGCTG GGATCGTCCA ATCTGCTCGG TGAAGCGTTG
CGGGCGCAGG TGGCACGGCT GCCGGAAATG CCGAAACCAC AACAGCTTGA TACCGAAATG
GCGCAGTTGC GTGTGCAACG GTTACGTTAT GAGGATCTGC TTAATAAACA GCCGCTGCTA
CGGCAAATTC ATCAGGCCGA CGGTCAGCCG CTGACCGCTG AGCAAAACCG TATTCTGGAA
GCACAGCTAC GCACTCAGCG TGAGTTGCTG AACTCATTGT TGCAGGGTGG CGATACGCTA
CTGCTGGAAC TGACCAAGCT GAAAGTCTCC AACGGGCAAC TGGAAGATGC GCTGAAAGAA
GTGAACGAAG CGACCCACCG CTATCTGTTC TGGACCTCTG ACGTGCGCCC GATGACCATC
GCCTGGCCGC TGGAAATCGC CCAGGATCTG CGTCGTCTCA TTTCGCTGGA CACCTTCAGT
CAGTTGGGCA AAGCCAGTGT GATGATGCTG ACCAGCAAAG AGACGATTTT GCCGCTGTTT
GGCGCGTTGA TTCTGGTCGG TTGCAGTATT TACTCGCGCC GCTATTTCAC CCGTTTTCTT
GAACGTTCGG CGGCGAAAGT CGGCAAAGTG ACTCAGGATC ACTTCTGGCT GACGTTGCGC
ACTCTTTTCT GGTCGATTCT CGTCGCGTCA CCGCTGCCGG TGCTGTGGAT GACGCTGGGT
TACGGCTTGC GCGAGGCGTG GCCTTATCCG CTGGCGGTCG CGATTGGTGA TGGCGTCACA
GCCACCGTGC CGCTGCTGTG GGTAGTGATG ATTTGCGCTA CCTTTGCCCG CCCGAACGGC
TTGTTTATCG CTCATTTTGG CTGGCCGCGC GAACGTGTTT CTCGTGGGAT GCGCTACTAC
CTGATGAGCA TCGGGCTTAT TGTGCCACTG ATTATGGCGC TGATGATGTT CGATAACCTC
GACGACCGCG AATTTTCCGG TTCGCTGGGA CGGCTTTGCT TTATCCTCAT TTGCGGTGCG
CTGGCGGTGG TCACCCTCAG CCTGAAAAAG GCCGGGATCC CGCTGTATCT CAACAAAGAA
GGCAGCGGCG ACAATATTAC CAACCATATG TTGTGGAACA TGATGATTGG CGCGCCACTG
GTTGCCATTC TGGCGTCGGC GGTGGGTTAT CTGGCAACGG CACAGGCGCT GTTAGCGAGG
CTTGAAACCT CGGTTGCCAT CTGGTTCCTG CTACTGGTGG TTTATCACGT TATCCGCCGC
TGGATGCTGA TCCAACGACG CAGGCTGGCG TTTGACCGGG CGAAGCATCG CCGGGCAGAG
ATGTTAGCGC AACGTGCGCG TGGCGAAGAG GAAGCACATC ATCACAGTAG CCCGGAAGGG
GCAATTGAAG TCGATGAAAG CGAAGTCGAT CTCGATGCCA TCAGTGCGCA GTCCTTGCGG
CTAGTGCGCT CAATTTTGAT GTTGATCGCC CTGCTTTCGG TCATTGTGCT GTGGTCAGAA
ATCCATTCCG CTTTCGGCTT CCTCGAAAAT ATTTCGCTGT GGGATGTCAC CTCCACGGTA
CAGGGCGTAG AAAGTCTGGA GCCGATTACC CTCGGTGCGG TGCTGATTGC CATTCTGGTG
TTTATCATCA CCACGCAGCT GGTGCGCAAT CTGCCCGCGC TGCTGGAACT GGCGATTTTG
CAGCACCTGG ATTTAACGCC GGGTACCGGC TACGCCATCA CCACCATCAC CAAATATCTG
CTGATGCTGA TTGGCGGGCT GGTCGGCTTC TCGATGATTG GTATTGAGTG GTCGAAATTG
CAGTGGCTGG TCGCCGCGCT CGGTGTTGGT CTCGGTTTTG GTTTGCAGGA AATTTTCGCC
AACTTTATCT CTGGCCTGAT CATCCTGTTC GAAAAACCGA TTCGCATTGG CGATACGGTG
ACAATTCGCG ATCTTACTGG TAGCGTGACG AAAATTAATA CCCGCGCAAC CACCATCAGC
GACTGGGACC GTAAAGAGAT AATCGTGCCG AACAAGGCGT TTATTACCGA GCAGTTTATC
AACTGGTCGC TCTCTGACTC GGTCACGCGC GTGGTGTTGA CGATTCCGGC CCCTGCCGAT
GCCAACAGTG AAGAAGTGAC GGAAATCCTG CTCACCGCAG CGCGTCGCTG CTCGCTGGTG
ATCGACAACC CGGCACCGGA AGTCTTCCTG GTGGATCTGC AACAGGGGAT TCAGATTTTC
GAGCTGCGTA TTTACGCCGC TGAGATGGGT CACCGTATGC CGCTACGCCA TGAGATCCAC
CAGCTGATTC TGGCTGGCTT CCATGCCCAC GGTATCGATA TGCCATTCCC GCCCTTCCAG
ATGCGTCTGG AAAGCCTCAA CGGTAAACAA ACGGGGAGAA CGCTGACGTC TGCGGGCAAA
GGTCGTCAGG CGGGAAGTTT GTAA
|
|---|
| Protein sequence | MRLIITFLMA WCLSWGAYAA TAPDSKQITQ ELEQAKAAKP AQPEVVEALQ SALNALEERK
GSLERIKQYQ EVIDNYPKLS ATLRAQLNNM RDEPRSVSPG MSTDALNQEI LQVSSQLLDK
SRQAQQEQER AREIADSLNQ LPQQQTDARR QLNEIERRLG TLTGNTPLNQ AQNFALQSDS
ARLKALVDEL ELAQLSANNR QELARLRSEL AEKESQQLDA YLQALRNQLN SQRQLEAERA
LESTELLAEN SADLPKDIVA QFKINRELSA ALNQQAQRMD LVASQQRQAA SQTLQVRQAL
NTLREQSQWL GSSNLLGEAL RAQVARLPEM PKPQQLDTEM AQLRVQRLRY EDLLNKQPLL
RQIHQADGQP LTAEQNRILE AQLRTQRELL NSLLQGGDTL LLELTKLKVS NGQLEDALKE
VNEATHRYLF WTSDVRPMTI AWPLEIAQDL RRLISLDTFS QLGKASVMML TSKETILPLF
GALILVGCSI YSRRYFTRFL ERSAAKVGKV TQDHFWLTLR TLFWSILVAS PLPVLWMTLG
YGLREAWPYP LAVAIGDGVT ATVPLLWVVM ICATFARPNG LFIAHFGWPR ERVSRGMRYY
LMSIGLIVPL IMALMMFDNL DDREFSGSLG RLCFILICGA LAVVTLSLKK AGIPLYLNKE
GSGDNITNHM LWNMMIGAPL VAILASAVGY LATAQALLAR LETSVAIWFL LLVVYHVIRR
WMLIQRRRLA FDRAKHRRAE MLAQRARGEE EAHHHSSPEG AIEVDESEVD LDAISAQSLR
LVRSILMLIA LLSVIVLWSE IHSAFGFLEN ISLWDVTSTV QGVESLEPIT LGAVLIAILV
FIITTQLVRN LPALLELAIL QHLDLTPGTG YAITTITKYL LMLIGGLVGF SMIGIEWSKL
QWLVAALGVG LGFGLQEIFA NFISGLIILF EKPIRIGDTV TIRDLTGSVT KINTRATTIS
DWDRKEIIVP NKAFITEQFI NWSLSDSVTR VVLTIPAPAD ANSEEVTEIL LTAARRCSLV
IDNPAPEVFL VDLQQGIQIF ELRIYAAEMG HRMPLRHEIH QLILAGFHAH GIDMPFPPFQ
MRLESLNGKQ TGRTLTSAGK GRQAGSL
|
|---|
| |