Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5648 |
Symbol | cadB |
ID | 6970261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5288347 |
End bp | 5289681 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643389282 |
Product | lysine/cadaverine antiporter |
Protein accession | YP_002273679 |
Protein GI | 209397656 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.742778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.745814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTG CCAAGAAGAT CGGGCTATTT GCCTGTACCG GTGTTGTTGC CGGTAATATG ATGGGGAGCG GTATTGCATT ATTACCTGCG AACCTAGCAA GTATCGGTGG TATTGCTATC TGGGGTTGGA TTATCTCTAT TATTGGTGCA ATGTCGCTGG CGTATGTATA TGCCCGACTG GCAACAAAAA ACCCGCAACA AGGTGGCCCA ATTGCTTATG CCGGAGAAAT TTCTCCTGCA TTTGGTTTTC AGACAGGTGT TCTTTATTAC CATGCTAACT GGATTGGTAA CCTGGCGATT GGTATTACCG CTGTATCTTA TCTTTCCACC TTCTTCCCAG TATTAAATGA TCCTGTTCCG GCGGGTATCG CCTGTATTGC TATCGTCTGG GTATTTACCT TTGTAAATAT GCTCGGCGGT ACCTGGGTAA GCCGTTTAAC CACTATTGGT CTGGTGCTGG TTCTTATTCC TGTGGTGATG ACTGCTATTG TTGGCTGGCA TTGGTTTGAT GCGGCAACTT ATGCAGCTAA CTGGAATACT GCGGATACCA CTGATGGTCA TGCGATCATT AAAAGTATTC TGCTCTGCCT GTGGGCCTTC GTGGGTGTTG AATCCGCAGC TGTAAGTACT GGTATGGTTA AAAACCCGAA ACGTACCGTT CCGCTGGCAA CCATGCTGGG TACTGGTTTA GCAGGTATTG TTTACATCGC TGCGACTCAG GTGCTTTCCG GTATGTATCC GTCTTCTGTA ATGGCGGCTT CCGGTGCTCC GTTTGCAATC AGTGCTTCAA CTATCCTCGG TAACTGGGCT GCGCCGCTGG TTTCTGCATT CACCGCCTTT GCGTGCCTGA CTTCTCTGGG CTCCTGGATG ATGTTGGTAG GCCAGGCAGG TGTACGTGCC GCTAACGACG GTAACTTCCC GAAAGTTTAT GGTGAAGTCG ACAGCAACGG TATTCCGAAA AAAGGTCTGC TGCTGGCTGC AGTGAAAATG ACTGCCCTGA TGATCCTCAT CACTCTGATG AACTCTGCCG GTGGTAAAGC ATCTGACCTG TTCGGTGAAC TGACCGGTAT CGCAGTACTG CTGACTATGC TGCCGTACTT CTACTCTTGC GTTGACCTGA TTCGTTTTGA AGGCGTTAAC ATCCGCAACT TTGTCAGCCT GATCTGCTCT GTACTGGGTT GCGTGTTCTG CTTCATCGCG CTGATGGGCG CAAGCTCCTT CGAGCTGGCA GGTACCTTCA TCGTCAGCCT GATTATCCTG ATGTTCTACG CTCGCAAAAT GCACGAGCGC CAGAGCCACT CAATGGATAA CCACACCGCG TCTAACGCAC ATTAA
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Protein sequence | MSSAKKIGLF ACTGVVAGNM MGSGIALLPA NLASIGGIAI WGWIISIIGA MSLAYVYARL ATKNPQQGGP IAYAGEISPA FGFQTGVLYY HANWIGNLAI GITAVSYLST FFPVLNDPVP AGIACIAIVW VFTFVNMLGG TWVSRLTTIG LVLVLIPVVM TAIVGWHWFD AATYAANWNT ADTTDGHAII KSILLCLWAF VGVESAAVST GMVKNPKRTV PLATMLGTGL AGIVYIAATQ VLSGMYPSSV MAASGAPFAI SASTILGNWA APLVSAFTAF ACLTSLGSWM MLVGQAGVRA ANDGNFPKVY GEVDSNGIPK KGLLLAAVKM TALMILITLM NSAGGKASDL FGELTGIAVL LTMLPYFYSC VDLIRFEGVN IRNFVSLICS VLGCVFCFIA LMGASSFELA GTFIVSLIIL MFYARKMHER QSHSMDNHTA SNAH
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