| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5579 |
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| Symbol | nrfE |
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| ID | 6969070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5219841 |
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| End bp | 5221520 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643389218 |
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| Product | heme lyase subunit NrfE |
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| Protein accession | YP_002273615 |
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| Protein GI | 209397457 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTAAGTC TCGGGGTCAA CGTGTTGACC CCGTTGACGG CCTTTGCGGG AGTGCGGTTG
CGCTGGCCTG CCATGATGCG ACTCACTTGC ATCGGCATTC TGGCACAGTT CGCGCTCCTG
CTGCTCGCCT TTGGCGTACT GACGTATTGT TTTCTCATCA GCGATTTCTC GGTCATTTAT
GTCGCCCAAC ATAGCTACAG CTTGCTGTCG TGGAAACTCA AACTGGCGGC GGTGTGGGGC
GGTCATGAAG GTTCGCTGCT GCTTTGGGTG CTGCTGCTTT CCGCCTGGAG CGCGCTGTTT
GCCTGGCAAT ATCGGCAGCA AACCGATCCG CTATTTCCGC TGACGCTAGC CGTTTTATCT
CTCATGCTCG CCGCACTGCT ACTGTTTGTA GTGCTGTGGT CCGATCCCTT CGTGCGGATA
TTTCCACCAG CAATCGAAGG CCGCGATCTC AATCCGATGC TGCAACATCC CGGTCTTATC
TTTCATCCAC CGCTGCTTTA CCTTGGCTAT GGCGGTTTGA TGGTAGCGGC GAGCGTGGCG
CTGGCGAGTC TACTGCGCGG CGAGTTTGAT GGTGCCTGCG CCCGAATTTG CTGGCGCTGG
GCGTTACCTG GCTGGAGTGC ATTAACTGCG GGGATCATCC TCGGTTCCTG GTGGGCCTAC
TGCGAACTCG GCTGGGGCGG CTGGTGGTTC TGGGATCCGG TGGAAAACGC CTCTTTATTA
CCCTGGCTTT CTGCCACTGC GCTGCTGCAC AGTTTATCCC TGACACGCCA GCGGGGGATT
TTTCGCCACT GGTCGCTGTT GTTGGCGATA GTTACTCTGA TGCTGTCGCT GCTGGGCACC
TTAATTGTCC GTTCTGGCAT TCTGGTTTCG GTTCATGCGT TCGCTCTGGA TAACGTTCGC
GCTGTGCCGT TGTTCAGCCT GTTTGCACTG ATTAGCCTTG CGTCTCTGGC TCTGTATGGC
TGGCGAGCGC GGGACGGTGG CCCGGCGGTG CGTTTTTCGG GGTTATCGCG GGAAATGTTA
ATCCTCGCTA CGCTGTTGCT GTTTTGCGCA GTGCTACTGA TCGTGCTGGT GGGAACGCTT
TATCCGATGA TTTACGGCCT GCTGGGCTGG GGACGTCTCT CCGTTGGCGC ACCGTATTTT
AACCGCGCGA CGTTACCGTT TGGTCTGTTG ATGTTGGTGG TGATTGTGCT GGCGACGTTT
GTCTCTGGCA AACGCGCGCA GCTTCCGGCG CTGCTGGCGC ATGCGGGCAT ACTGTTATTT
GCCGCAGGGA TCGTTGTCTC CAGCGTCAGC CGTCAGGAGA TCAGCCTGAA TTTACAGCCG
GGTCAGCAGG TGACGCTGGC AGGATACACC TTCCGTTTTG AGCGCCTCGA TCTGCAAGCC
AAAGGCAATT ACACCAGCGA AAAAGCGATA GTGGCGCTGT TTGACCATCA GCAACGCATT
GGTGAATTAA CGCCGGAGCG GCGTTTTTAC GAAGCTCGTC GTCAGCAAAT GATGGAACCG
TCAATTCGCT GGAACGGCAT CCATGACTGG TATGCGGTCA TGGGGGAGAA AACTGGAGCG
GATCGTTACG CTTTTCGCTT GTATGTACAA AGCGGTGTGC GCTGGATCTG GGGGGGAGGA
TTGTTGATGA TTGCGGGCGC ATTGTTAAGC GGATGGCGGG GGAAGAAGCG CGATGTATAA
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| Protein sequence | MLSLGVNVLT PLTAFAGVRL RWPAMMRLTC IGILAQFALL LLAFGVLTYC FLISDFSVIY
VAQHSYSLLS WKLKLAAVWG GHEGSLLLWV LLLSAWSALF AWQYRQQTDP LFPLTLAVLS
LMLAALLLFV VLWSDPFVRI FPPAIEGRDL NPMLQHPGLI FHPPLLYLGY GGLMVAASVA
LASLLRGEFD GACARICWRW ALPGWSALTA GIILGSWWAY CELGWGGWWF WDPVENASLL
PWLSATALLH SLSLTRQRGI FRHWSLLLAI VTLMLSLLGT LIVRSGILVS VHAFALDNVR
AVPLFSLFAL ISLASLALYG WRARDGGPAV RFSGLSREML ILATLLLFCA VLLIVLVGTL
YPMIYGLLGW GRLSVGAPYF NRATLPFGLL MLVVIVLATF VSGKRAQLPA LLAHAGILLF
AAGIVVSSVS RQEISLNLQP GQQVTLAGYT FRFERLDLQA KGNYTSEKAI VALFDHQQRI
GELTPERRFY EARRQQMMEP SIRWNGIHDW YAVMGEKTGA DRYAFRLYVQ SGVRWIWGGG
LLMIAGALLS GWRGKKRDV
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