| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5525 |
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| Symbol | dinF |
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| ID | 6972227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5175332 |
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| End bp | 5176657 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643389168 |
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| Product | DNA-damage-inducible SOS response protein |
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| Protein accession | YP_002273565 |
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| Protein GI | 209400391 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.580203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCATTCC TCACTTCATC TGATAAAGCA CTTTGGCATC TCGCCTTACC CATGATTTTC
TCCAATATCA CTGTTCCGTT GCTGGGACTG GTCGATACGG CGGTTATTGG TCATCTTGAT
AGTCCGGTTT ATTTGGGCGG CGTGGCGGTT GGTGCAACGG CGACCAGCTT TCTCTTTATG
CTGTTGCTGT TTTTACGCAT GAGCACCACC GGGCTGACTG CGCAGGCTTA TGGTGCCAAA
AATCCTCAGG CATTAGCCCG TGCGCTGGTG CAACCTTTGC TGTTGGCGTT GGGGGCTGGG
GCGTTAATTG CGCTGCTGCG TACGCCGATT ATCGATCTGG CGCTGCATAT TGTTGGCGGT
AGTGAAGCAG TCCTGGAACA GGCGCGGCGC TTTCTTGAAA TCCGCTGGTT AAGCGCACCG
GCGTCGCTGG CGAATCTGGT ATTACTTGGT TGGTTACTCG GCGTGCAATA TGCCCGTGCG
CCAGTAATTT TGTTAGTGGT CGGCAATATC CTCAACATTG TGCTGGATGT CTGGCTGGTG
ATGGGACTGC ATATGAACGT GCGGGGCGCG GCGCTGGCGA CGGTTATTGC GGAATATGCA
ACATTGCTGA TTGGTCTGCT AATGGTGCGT AAAATCCTCA AACTACGCGG AATCTCCGGC
GAAATGCTGA AAACTTCCTG GCGAGGAAAC TTCCGTCGCT TGCTGGCACT TAACCGCGAT
ATCATGCTGC GCTCGCTGTT GTTGCAACTC TGTTTCGGCG CGATCACCGT ACTTGGCGCG
CGACTGGGGA GTGACATTAT CGCTGTTAAC GCGGTTCTGA TGACGCTACT CACCTTTACC
GCCTATGCGC TGGACGGTTT TGCCTACGCG GTTGAAGCAC ATTCCGGTCA GGCATACGGT
GCGCGCGACG GTAGCCAGTT GCTGGATGTC TGGCGGGCAG CATGCCGCCA GTCGGGGATC
GTAGCGTTAC TGTTTTCGGT GGTTTATTTG CTGGCAGGGG AACACATCAT TGCGTTACTG
GCGTCGTTAA CCCAGATTCA GCAGCTGGCC GACCGCTATC TTATCTGGCA GGTGATTTTG
CCGTTGGTCG GCGTCTGGTG TTATCTGCTG GACGGCATGT TTATAGGCGC AACGCGTGCT
GCTGAAATGC GTAACAGTAT GGCGGTGGCC GCCGCAGGTT TTGCGCTGAC GCTCCTTACG
CTGCCGTGGC TGGGTAATCA TGGTTTGTGG TTGGCGTTAA CCGTCTTTCT GGCGTTGCGC
GGGCTTTCTC TGGCAGCTAT CTGGCGGCGT CACTGGCGCA ACGGTACCTG GTTTGCCGCA
ACGTGA
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| Protein sequence | MAFLTSSDKA LWHLALPMIF SNITVPLLGL VDTAVIGHLD SPVYLGGVAV GATATSFLFM
LLLFLRMSTT GLTAQAYGAK NPQALARALV QPLLLALGAG ALIALLRTPI IDLALHIVGG
SEAVLEQARR FLEIRWLSAP ASLANLVLLG WLLGVQYARA PVILLVVGNI LNIVLDVWLV
MGLHMNVRGA ALATVIAEYA TLLIGLLMVR KILKLRGISG EMLKTSWRGN FRRLLALNRD
IMLRSLLLQL CFGAITVLGA RLGSDIIAVN AVLMTLLTFT AYALDGFAYA VEAHSGQAYG
ARDGSQLLDV WRAACRQSGI VALLFSVVYL LAGEHIIALL ASLTQIQQLA DRYLIWQVIL
PLVGVWCYLL DGMFIGATRA AEMRNSMAVA AAGFALTLLT LPWLGNHGLW LALTVFLALR
GLSLAAIWRR HWRNGTWFAA T
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