| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5466 |
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| Symbol | hemE |
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| ID | 6971373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5109654 |
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| End bp | 5110718 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643389112 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002273513 |
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| Protein GI | 209398331 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.843277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC TTAAAAACGA TCGTTATCTG CGGGCGCTGC TGCGCCAGCC CGTTGATGTC
ACTCCTGTAT GGATGATGCG CCAGGCGGGT CGCTATCTAC CGGAATATAA AGCCACGCGC
GCCCAGGCGG GCGATTTTAT GTCGCTGTGC AAAAACGCCG AGCTGGCGTG TGAAGTGACC
TTGCAACCGC TGCGTCGCTA CCCGCTGGAT GCGGCGATCC TCTTTTCCGA TATCCTCACC
GTCCCGGACG CGATGGGGTT AGGGCTCTAT TTTGAAGCCG GAGAAGGTCC GCGTTTTACC
TCGCCAGTCA CCTGCAAAGC TGACGTCGAT AAACTGCCAA TTCCGGACCC GGAAGATGAA
CTGGGGTACG TGATGAACGC GGTGCGTACC ATTCGTCGCG AACTGAAAGG CGAAGTGCCG
CTGATTGGTT TTTCCGGCAG CCCGTGGACG CTGGCGACCT ACATGGTGGA AGGCGGCAGC
AGCAAAGCCT TCACCGTGAT CAAAAAAATG ATGTATGCCG ATCCGCAGGC GCTGCACGCT
CTACTCGATA AACTGGCGAA AAGCGTCGCT TTGTATCTGA ATGCGCAGAT TAAAGCCGGT
GCTCAGGCTG TGATGATTTT CGACACCTGG GGCGGCGTGC TTACCGGGCG CGATTATCAA
CAGTTCTCGC TTTATTACAT GCATAAAATT GTTGATGGTT TACTGCGTGA AAACGACGGT
CGCCGCGTAC CGGTCACGCT GTTTACCAAA GGCGGCGGAC AGTGGCTGGA AGCCATGGCA
GAAACCGGTT GCGATGCGCT GGGCCTCGAC TGGACAACGG ACATCGCCGA TGCGCGCCGC
CGTGTGGGCA ATAAAGTCGC GTTGCAGGGT AATATGGATC CGTCGATGCT GTACGCGCCG
CCTGCCCGCA TTGAAGAAGA AGTAGCGACT ATACTTGCAG GTTTCGGTCA CGGCGAAGGT
CATGTCTTTA ACCTTGGTCA CGGCATTCAT CAGGATGTGC CGCCAGAACA TGCTGGCGTG
TTCGTGGAGG CAGTGCATCG ACTGTCTGAA CAGTATCACC GCTAA
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| Protein sequence | MTELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT
LQPLRRYPLD AAILFSDILT VPDAMGLGLY FEAGEGPRFT SPVTCKADVD KLPIPDPEDE
LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTVIKKM MYADPQALHA
LLDKLAKSVA LYLNAQIKAG AQAVMIFDTW GGVLTGRDYQ QFSLYYMHKI VDGLLRENDG
RRVPVTLFTK GGGQWLEAMA ETGCDALGLD WTTDIADARR RVGNKVALQG NMDPSMLYAP
PARIEEEVAT ILAGFGHGEG HVFNLGHGIH QDVPPEHAGV FVEAVHRLSE QYHR
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