Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5366 |
Symbol | cpxA |
ID | 6972233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5006675 |
End bp | 5008048 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643389020 |
Product | two-component sensor protein |
Protein accession | YP_002273429 |
Protein GI | 209398760 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.135229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGCA GCTTAACCGC GCGCATCTTC GCCATCTTCT GGCTGACGCT GGCGCTGGTG TTGATGTTGG TTTTGATGTT ACCCAAGCTC GATTCACGCC AGATGACCGA GCTTCTGGAT AGCGAACAGC GTCAGGGTCT GATGATTGAG CAGCATGTTG AAGCGGAGCT GGCGAACGAT CCGCCCAACG ATTTAATGTG GTGGCGGCGT CTGTTCCGGG CGATTGATAA GTGGGCACCG CCAGGACAGC GTTTGTTATT GGTGACCACC GAAGGCCGCG TGATCGGCGC TGAACGCAGC GAAATGCAGA TCATTCGTAA CTTTATTGGT CAGGCCGATA ACGCCGATCA TCCGCAGAAG AAAAAGTATG GCCGCGTGGA ACTGGTCGGT CCGTTCTCCG TGCGTGATGG CGAAGATAAT TACCAACTTT ATCTGATTCG TCCGGCCAGC AGTTCTCAAT CCGATTTCAT TAACTTACTG TTTGACCGCC CGCTATTACT GCTGATTGTC ACCATGTTGG TCAGTACGCC GCTGCTGTTG TGGTTGGCCT GGAGTCTGGC AAAACCGGCG CGTAAGCTGA AAAACGCTGC CGATGAAGTT GCCCAGGGAA ACTTACGCCA GCACCCGGAA CTGGAAGCGG GGCCACAGGA ATTCCTTGCC GCAGGTGCCA GTTTTAACCA GATGGTCACC GCGCTGGAGC GCATGATGAC CTCTCAGCAG CGTCTGCTTT CTGATATCTC TCACGAGCTG CGCACCCCGC TGACGCGTCT GCAACTGGGT ACGGCGTTAC TGCGCCGTCG TAGTGGTGAA AGCAAGGAAC TGGAGCGTAT TGAAACCGAA GCGCAACGTC TGGACAGCAT GATTAACGAC CTGTTGGTGA TGTCACGTAA TCAGCAAAAA AACGCGCTGG TTAGCGAGAC CATCAAAGCC AATCAGTTGT GGAGTGAAGT GCTGGATAAC GCGGCGTTCG AAGCCGAGCA AATGGGCAAG TCGTTGACAG TTAACTTCCC GCCTGGGCCG TGGCCGCTGT ACGGCAACCC GAACGCCCTG GAGAGTGCGC TGGAAAACAT TGTTCGTAAT GCCCTGCGTT ATTCCCATAC GAAGATTGAA GTGGGCTTTG CGGTAGATAA AGACGGTATC ACCATTACGG TGGACGACGA TGGTCCTGGC GTTAGCCCGG AAGATCGCGA ACAGATTTTC CGTCCGTTCT ATCGGACCGA TGAAGCGCGC GATCGTGAAT CTGGCGGTAC AGGTTTGGGA CTGGCGATTG TTGAAACCGC CATTCAGCAG CATCGTGGCT GGGTGAAAGC AGAAGACAGC CCGCTGGGCG GTTTACGGCT GGTGATTTGG TTGCCGCTGT ATAAGCGGAG TTAA
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Protein sequence | MIGSLTARIF AIFWLTLALV LMLVLMLPKL DSRQMTELLD SEQRQGLMIE QHVEAELAND PPNDLMWWRR LFRAIDKWAP PGQRLLLVTT EGRVIGAERS EMQIIRNFIG QADNADHPQK KKYGRVELVG PFSVRDGEDN YQLYLIRPAS SSQSDFINLL FDRPLLLLIV TMLVSTPLLL WLAWSLAKPA RKLKNAADEV AQGNLRQHPE LEAGPQEFLA AGASFNQMVT ALERMMTSQQ RLLSDISHEL RTPLTRLQLG TALLRRRSGE SKELERIETE AQRLDSMIND LLVMSRNQQK NALVSETIKA NQLWSEVLDN AAFEAEQMGK SLTVNFPPGP WPLYGNPNAL ESALENIVRN ALRYSHTKIE VGFAVDKDGI TITVDDDGPG VSPEDREQIF RPFYRTDEAR DRESGGTGLG LAIVETAIQQ HRGWVKAEDS PLGGLRLVIW LPLYKRS
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