Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5264 |
Symbol | rhtC |
ID | 6971270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4907188 |
End bp | 4907802 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643388928 |
Product | threonine efflux system |
Protein accession | YP_002273342 |
Protein GI | 209396889 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.613043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATTTC TCACCGTCGC CATGGTGCAC ATTGTGGCGC TTATGAGTCC CGGTCCCGAT TTCTTTTTTG TCTCTCAGAC CGCTGTCAGT CGTTCCCGTA AAGAAGCGAT GATGGGCGTG CTGGGTATTA CCTGCGGCGT TATGGTTTGG GCAGGGATTG CGTTGCTTGG CCTGCATTTG ATTATCGAAA AAATGGCCTG GCTGCATACG CTGATTATGG TTGGCGGTGG CCTGTATCTC TGCTGGATGG GTTACCAGAT GCTGCGCGGC GCGCTGAAAA AAGAGGCGGT TTCTGCACCT GCGCCACAGG TCGAGCTGGC GAAAAGTGGG CGCAGTTTCC TGAAAGGTTT ACTGACCAAT CTCGCTAATC CGAAAGCGAT TATCTACTTT GGCTCGGTGT TCTCATTGTT TGTCGGTGAT AACGTTGGCA CTACCGCGCG CTGGGGCATT TTCGCGTTGA TTATTGTCGA AACGCTGGCG TGGTTTACTG TGGTGGCCAG CCTGTTTGCC CTGCCGCAAA TGCGCCGTGG TTATCAACGT CTGGCGAAGT GGATTGATGG TTTTGCCGGG GCGTTATTTG CCGGATTTGG CATTCATTTG ATTATTTCGC GGTAA
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Protein sequence | MLFLTVAMVH IVALMSPGPD FFFVSQTAVS RSRKEAMMGV LGITCGVMVW AGIALLGLHL IIEKMAWLHT LIMVGGGLYL CWMGYQMLRG ALKKEAVSAP APQVELAKSG RSFLKGLLTN LANPKAIIYF GSVFSLFVGD NVGTTARWGI FALIIVETLA WFTVVASLFA LPQMRRGYQR LAKWIDGFAG ALFAGFGIHL IISR
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