Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5263 |
Symbol | recQ |
ID | 6970470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4905283 |
End bp | 4907118 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643388927 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_002273341 |
Protein GI | 209400089 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.695622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATGTGG CGCAGGCGGA AGTGTTGAAT CTGGAGTCCG GAGCTAAACA GGTTTTACAA GAAACCTTTG GCTACCAACA GTTTCGCCCC GGCCAGGAAG AAATTATCGA CACTGTGCTT TCCGGTCGCG ATTGCCTGGT CGTCATGCCC ACCGGTGGCG GAAAATCCCT TTGCTATCAA ATTCCTGCCT TATTGCTAAA CGGCCTTACC GTGGTTGTTT CACCGCTGAT TTCGTTGATG AAAGATCAGG TGGATCAACT GCAAGCCAAC GGCGTGGCGG CGGCGTGCCT TAACTCGACG CAAACCCGCG AACAGCAACT TGAAGTGATG ACAGGCTGCC GCACCGGGCA AATTCGTCTG CTTTATATCG CCCCGGAACG CCTGATGCTG GATAACTTTC TTGAGCATCT GGCGCACTGG AATCCGGTGT TATTAGCCGT TGATGAAGCG CACTGTATCT CCCAATGGGG CCACGATTTC CGCCCGGAAT ATGCCGCGCT CGGTCAGTTG CGCCAGCGGT TCCCGACGCT GCCGTTTATG GCGCTGACCG CCACAGCCGA CGACACCACG CGCCAGGATA TCGTGCGCCT GCTGGGGCTG AACGATCCGC TGATTCAAAT CAGCAGTTTT GACCGTCCGA ATATTCGCTA CATGCTGATG GAGAAATTCA AACCGCTCGA TCAGTTGATG CGCTACGTGC AGGAACAGCG CGGTAAGTCC GGCATTATCT ACTGCAACAG CCGGGCGAAA GTAGAAGACA CCGCTGCGCG CCTGCAAAGC AAGGGTATTA GCGCGGCGGC CTATCATGCC GGGCTGGAAA ATAATGTCCG CGCCGACGTG CAGGAGAAAT TCCAGCGCGA TGACCTGCAA ATTGTGGTGG CGACGGTGGC GTTCGGCATG GGCATCAATA AACCAAACGT TCGCTTCGTG GTCCACTTTG ATATTCCGCG CAATATCGAA TCCTATTATC AGGAAACCGG TCGCGCCGGG CGTGATGGCC TGCCTGCGGA AGCGATGTTG TTTTACGATC CAGCTGATAT GGCGTGGCTG CGCCGTTGTC TGGAAGAGAA GCCGCAGGGG CAGTTGCAGG ATATCGAGCG CCACAAACTC AATGCGATGG GCGCGTTTGC CGAAGCGCAA ACTTGCCGTC GTCTGGTATT GCTGAACTAT TTTGGCGAAG GGCGTCAGGA GCCGTGCGGG AACTGCGATA TCTGCCTCGA TCCGCCGAAA CAGTACGACG GTTCAACCGA TGCTCAGATT GCCCTTTCCA CCATTGGTCG TGTGAATCAG CGGTTTGGGA TGGGTTATGT GGTGGAAGTG ATTCGTGGTG CTAATAACCA GCGTATCCGC GACTATGGTC ATGACAAACT GAAAGTCTAT GGCATGGGCC GTGATAAAAG CCATGAACAT TGGGTGAGCG TGATCCGCCA GCTGATTCAC CTCGGCCTGG TGACGCAAAA TATTGCCCAG CATTCTGCCC TACAACTGAC AGAGGCCGCG CGCCCGGTGC TGCGCGGCGA ATCCTCTTTA CAACTTGCCG TGCCGCGTAT CGTGGCGCTC AAACCGAAAG CGATGCAGAA ATCGTTCGGC GGCAACTATG ATCGCAAACT GTTCGCCAAA TTACGCAAAC TGCGTAAATC GATTGCCGAT GAAAGTAATG TCCCGCCGTA CGTGGTGTTT AACGACGCAA CCTTGATTGA GATGGCTGAA CAGATGCCGA TCACCGCCAG CGAAATGCTC AGCGTTAACG GCGTTGGGAT GCGCAAGCTG GAACGCTTTG GTAAACCGTT TATGGCGCTG ATTCGTGCGC ATGTCGATGG CGACGACGAA GAGTAG
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Protein sequence | MNVAQAEVLN LESGAKQVLQ ETFGYQQFRP GQEEIIDTVL SGRDCLVVMP TGGGKSLCYQ IPALLLNGLT VVVSPLISLM KDQVDQLQAN GVAAACLNST QTREQQLEVM TGCRTGQIRL LYIAPERLML DNFLEHLAHW NPVLLAVDEA HCISQWGHDF RPEYAALGQL RQRFPTLPFM ALTATADDTT RQDIVRLLGL NDPLIQISSF DRPNIRYMLM EKFKPLDQLM RYVQEQRGKS GIIYCNSRAK VEDTAARLQS KGISAAAYHA GLENNVRADV QEKFQRDDLQ IVVATVAFGM GINKPNVRFV VHFDIPRNIE SYYQETGRAG RDGLPAEAML FYDPADMAWL RRCLEEKPQG QLQDIERHKL NAMGAFAEAQ TCRRLVLLNY FGEGRQEPCG NCDICLDPPK QYDGSTDAQI ALSTIGRVNQ RFGMGYVVEV IRGANNQRIR DYGHDKLKVY GMGRDKSHEH WVSVIRQLIH LGLVTQNIAQ HSALQLTEAA RPVLRGESSL QLAVPRIVAL KPKAMQKSFG GNYDRKLFAK LRKLRKSIAD ESNVPPYVVF NDATLIEMAE QMPITASEML SVNGVGMRKL ERFGKPFMAL IRAHVDGDDE E
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