Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5176 |
Symbol | gidB |
ID | 6969858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4819596 |
End bp | 4820219 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643388842 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_002273268 |
Protein GI | 209399374 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000263973 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.0413042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCAACA AACTCTCCTT ACTGCTGAAA GACGCAGGTA TTTCGCTTAC CGATCACCAG AAAAACCAGC TTATTGCCTA CGTGAATATG CTGCATAAAT GGAACAAAGC GTACAACCTG ACTTCGGTCC GCGATCCTAA TGAGATGCTG GTACGCCATA TTCTCGATAG CATTGTGGTG GCACCGTATC TGCAAGGTGA ACGGTTTATC GATGTCGGCA CCGGTCCTGG ACTGCCTGGC ATTCCACTCT CTATCGTGCG TCCTGAAGCC CATTTCACTC TGTTGGATAG CCTTGGTAAA CGCGTGCGTT TCCTTCGTCA GGTGCAACAT GAGCTTAAAC TGGAGAATAT TGAGCCAGTA CAGAGCAGGG TAGAAGAGTT TCCTTCAGAG CCGCCATTTG ATGGCGTAAT TAGCCGCGCT TTTGCCTCTC TGAACGATAT GGTGAGCTGG TGCCACCATC TTCCTGGTGA GCAAGGCCGT TTCTACGCGC TGAAAGGGCA AATGCCGGAA GATGAAATCG CTTTGTTGCC CGAAGAATAT CAGGTCGAAT CAGTGGTTAA ACTTCAGGTT CCAGCCCTGG ATGGCGAACG TCATCTGGTG GTGATTAAAG CAAATAAAAT TTAA
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Protein sequence | MLNKLSLLLK DAGISLTDHQ KNQLIAYVNM LHKWNKAYNL TSVRDPNEML VRHILDSIVV APYLQGERFI DVGTGPGLPG IPLSIVRPEA HFTLLDSLGK RVRFLRQVQH ELKLENIEPV QSRVEEFPSE PPFDGVISRA FASLNDMVSW CHHLPGEQGR FYALKGQMPE DEIALLPEEY QVESVVKLQV PALDGERHLV VIKANKI
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