Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5127 |
Symbol | gyrB |
ID | 6970462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4767042 |
End bp | 4769459 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643388799 |
Product | DNA gyrase subunit B |
Protein accession | YP_002273225 |
Protein GI | 209396545 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.50645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.271851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATGTCGA ATTCTTATGA CTCCTCCAGT ATCAAAGTCC TGAAAGGGCT GGATGCGGTG CGTAAGCGCC CGGGTATGTA TATCGGCGAC ACGGATGACG GCACCGGTCT GCACCACATG GTATTCGAGG TGGTAGATAA CGCTATCGAC GAAGCGCTCG CGGGTCACTG TAAAGAAATT ATCGTCACCA TTCACGCCGA TAACTCTGTC TCTGTACAGG ATGACGGGCG CGGCATTCCG ACCGGTATTC ACCCGGAAGA GGGCGTATCG GCGGCGGAAG TGATCATGAC CGTTCTGCAC GCAGGCGGTA AATTTGACGA TAACTCCTAT AAAGTGTCCG GCGGTCTGCA CGGCGTTGGT GTTTCGGTAG TAAACGCCCT GTCGCAAAAA CTGGAGCTGG TTATTCAGCG CGAGGGTAAA ATTCACCGTC AGATCTACGA ACACGGTGTA CCGCAGGCAC CGCTGGCGGT TACCGGCGAG ACTGAAAAAA CCGGCACCAT GGTGCGTTTC TGGCCCAGCC TCGAAACCTT CACCAATGTG ACCGAGTTCG AATATGAAAT TCTGGCGAAA CGTCTGCGTG AGTTGTCGTT CCTCAACTCC GGCGTTTCCA TTCGTCTGCG CGACAAGCGT GACGGCAAAG AAGACCACTT CCACTATGAA GGCGGCATCA AAGCGTTCGT TGAATATCTG AACAAGAACA AAACGCCGAT CCACCCAAAT ATCTTCTACT TCTCCACCGA AAAAGACGGT ATCGGCGTTG AAGTGGCGCT GCAGTGGAAC GATGGCTTCC AGGAAAACAT CTACTGCTTT ACCAACAACA TTCCGCAGCG TGACGGCGGT ACTCACCTGG CAGGCTTCCG TGCGGCGATG ACCCGTACCC TGAATGCCTA CATGGACAAA GAAGGCTACA GCAAAAAAGC CAAAGTCAGC GCCACCGGTG ACGATGCGCG TGAAGGCCTG ATTGCGGTCG TTTCCGTAAA AGTGCCGGAC CCGAAATTCT CCTCCCAGAC CAAAGACAAA CTGGTTTCTT CTGAGGTGAA ATCGGCGGTT GAACAGCAGA TGAACGAACT GTTGGCGGAA TACCTGCTGG AAAACCCAAC TGACGCGAAA ATCGTGGTTG GCAAAATTAT CGATGCTGCC CGTGCCCGTG AAGCGGCGCG TCGCGCGCGT GAAATGACCC GCCGTAAAGG TGCGCTCGAC TTAGCGGGCC TGCCGGGCAA ACTGGCAGAC TGCCAGGAAC GCGATCCGGC GCTTTCCGAA CTGTACCTTG TGGAAGGGGA CTCCGCGGGC GGCTCTGCGA AGCAGGGGCG TAACCGCAAG AACCAGGCGA TTCTGCCGCT GAAGGGTAAA ATCCTCAACG TCGAGAAAGC GCGCTTCGAT AAGATGCTCT CTTCTCAGGA AGTGGCGACG CTTATCACCG CGCTTGGTTG TGGTATCGGT CGTGACGAGT ACAACCCGGA CAAACTGCGT TATCACAGCA TCATCATCAT GACCGATGCG GACGTCGACG GCTCGCACAT TCGTACGCTG CTGTTGACCT TCTTCTATCG TCAGATGCCG GAAATTGTTG AACGCGGTCA CGTCTACATC GCTCAGCCGC CGCTGTACAA AGTGAAGAAA GGCAAGCAGG AACAGTACAT TAAAGACGAC GAAGCGATGG ATCAGTACCA GATCTCTATC GCGCTGGACG GCGCAACGCT GCACACCAAC GCCAGCGCAC CGGCATTGGC TGGCGAAGCG TTAGAGAAAC TGGTGTCTGA GTACAACGCG ACGCAGAAAA TGATCAACCG CATGGAGCGT CGTTATCCGA AAGCAATGCT GAAAGAGCTT ATCTATCAGC CGACGCTGAC GGAAGCCGAC CTCTCTGATG AGCAGACCGT TACCCGGTGG GTGAACGCGC TGGTCAGCGA ACTGAACGAC AAAGAACAGC ACGGCAGCCA GTGGAAGTTT GATGTCCACA CCAATGCCGA ACAAAACCTG TTCGAGCCGA TTGTTCGCGT GCGTACCCAC GGTGTGGATA CTGACTATCC GCTGGATCAC GAGTTTATCA CTGGTGGCGA ATATCGTCGT ATCTGCACGC TGGGTGAGAA ACTGCGTGGC TTGCTGGAAG AAGATGCGTT TATCGAACGT GGCGAGCGTC GTCAGCCGGT AGCCAGCTTC GAGCAGGCGC TGGACTGGCT GGTGAAAGAG TCCCGTCGCG GCCTCTCCAT CCAGCGTTAT AAAGGTCTGG GCGAGATGAA CCCGGAACAG CTGTGGGAAA CCACCATGGA CCCGGAAAGC CGTCGTATGC TGCGCGTTAC CGTTAAGGAT GCGATTGCCG CTGACCAGTT GTTCACCACG CTGATGGGCG ACGCCGTTGA ACCGCGCCGT GCGTTTATTG AAGAGAACGC CCTGAAAGCG GCGAATATTG ATATTTAA
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Protein sequence | MMSNSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVVDNAID EALAGHCKEI IVTIHADNSV SVQDDGRGIP TGIHPEEGVS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG VSVVNALSQK LELVIQREGK IHRQIYEHGV PQAPLAVTGE TEKTGTMVRF WPSLETFTNV TEFEYEILAK RLRELSFLNS GVSIRLRDKR DGKEDHFHYE GGIKAFVEYL NKNKTPIHPN IFYFSTEKDG IGVEVALQWN DGFQENIYCF TNNIPQRDGG THLAGFRAAM TRTLNAYMDK EGYSKKAKVS ATGDDAREGL IAVVSVKVPD PKFSSQTKDK LVSSEVKSAV EQQMNELLAE YLLENPTDAK IVVGKIIDAA RAREAARRAR EMTRRKGALD LAGLPGKLAD CQERDPALSE LYLVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG RDEYNPDKLR YHSIIIMTDA DVDGSHIRTL LLTFFYRQMP EIVERGHVYI AQPPLYKVKK GKQEQYIKDD EAMDQYQISI ALDGATLHTN ASAPALAGEA LEKLVSEYNA TQKMINRMER RYPKAMLKEL IYQPTLTEAD LSDEQTVTRW VNALVSELND KEQHGSQWKF DVHTNAEQNL FEPIVRVRTH GVDTDYPLDH EFITGGEYRR ICTLGEKLRG LLEEDAFIER GERRQPVASF EQALDWLVKE SRRGLSIQRY KGLGEMNPEQ LWETTMDPES RRMLRVTVKD AIAADQLFTT LMGDAVEPRR AFIEENALKA ANIDI
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