Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5125 |
Symbol | yidA |
ID | 6966773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4765477 |
End bp | 4766289 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643388797 |
Product | sugar phosphatase |
Protein accession | YP_002273223 |
Protein GI | 209398934 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.231854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTATCA AACTCATTGC TATCGATATG GATGGCACCC TTCTGCTGCC CGATCACACC ATTTCACCTG CCGTTAAAAA TGCGATTGCC GCAGCTCGCG CCCGTGGCGT GAATGTCGTG CTAACGACGG GTCGCCCTTA TGCAGGTGTT CACAATTACC TGAAAGAGCT GCATATGGAA CAGCCGGGCG ACTACTGCAT TACTTATAAC GGCGCGCTGG TACAGAAGGC CGCTGATGGT AACACCGTGG CGCAAACTGC TCTCAGCTAT GACGACTATC GTTTCCTGGA AAAACTCTCT CGCGAAGTCG GTTCTCATTT CCACGCCCTG GACCGCACCA CGCTGTACAC CGCCAACCGT GATATCAGCT ACTACACGGT GCATGAATCC TTCGTTGCCA CCATTCCGCT GGTGTTCTGC GAAGCGGAGA AAATGGACCC CAATACCCAG TTCCTGAAAG TGATGATGAT TGATGAACCC GCCATCCTCG ACCAGGCTAT CGCGCGTATT CCGCAGGAAG TGAAAGAGAA ATATACCGTG CTGAAAAGTG CGCCGTACTT CCTCGAAATC CTTGATAAAC GCGTTAACAA AGGTACGGGT GTGAAATCAC TGGCCGACGT GTTAGGTATT AAACCGGAAG AAATCATGGC GATTGGCGAT CAGGAAAACG ACATCGCAAT GATTGAATAT GCAGGCGTCG GTGTGGCAAT GGATAATGCT ATTCCTTCGG TGAAAGAAGT GGCGAACTTT GTCACCAAAT CCAACCTTGA AGATGGCGTG GCGTTTGCTA TTGAGAAGTA TGTGCTGAAT TAA
|
Protein sequence | MAIKLIAIDM DGTLLLPDHT ISPAVKNAIA AARARGVNVV LTTGRPYAGV HNYLKELHME QPGDYCITYN GALVQKAADG NTVAQTALSY DDYRFLEKLS REVGSHFHAL DRTTLYTANR DISYYTVHES FVATIPLVFC EAEKMDPNTQ FLKVMMIDEP AILDQAIARI PQEVKEKYTV LKSAPYFLEI LDKRVNKGTG VKSLADVLGI KPEEIMAIGD QENDIAMIEY AGVGVAMDNA IPSVKEVANF VTKSNLEDGV AFAIEKYVLN
|
| |