Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5086 |
Symbol | nlpA |
ID | 6967997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 4728613 |
End bp | 4729431 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643388764 |
Product | cytoplasmic membrane lipoprotein-28 |
Protein accession | YP_002273190 |
Protein GI | 209399316 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.121383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGA CAACACATCA TCTACGGGCG GGGGCCGCAT TATTACTGGC AGGAGTTCTG CTGGCAGGTT GCGACCAGAG CAGCAGCGAT GAAAAGCATA TTAAAGTTGG CGTTATTAAT GGCGCAGAAC AAGATGTCGC AGAAGTCGCT AAAAAGGTAG CAAAAGAGAA ATATGGCCTC GATGTTGAAC TGGTAGGATT TAGCGGTTCG TTGCTACCGA ACGATGCGAC AAATAATGGC GAGCTTGATG CGAACGTCTT CCAGCATCGA CCCTTTCTTG AACAAGATAA TCAGACGCAT GGTTATAAAC TGGTAGCGGT GGGAAATACG TTTGTCTTCC CTATGGCGGG CTATTCCAAA AAAATCAAAA CCGTGGCGCA AATAAAAGAA GGTGCGACAG TGGCGATCCC CAACGACCCG ACTAACCTTG GTCGCGCGCT TTTACTGCTG CAAAAAGAGA AGCTAATTAC TCTGAAAGAG GGAAAAGGGT TATTACCTAC CGCGTTGGAT ATAACCGATA ATCCACGCCA TTTGCAGATA ATGGAGCTGG AAGGGGCACA GTTGCCACGT GTACTGGACG ACCCGAAAGT GGATGTAGCG ATTATCAGCA CCACTTACAT CGAGCAAACA GGACTTTCTC CGGTTAACGA CAGCGTATTT ATTGAAGATA AAAATTCGCC GTATGTGAAT ATTCTGGTGG CACGGGAAGA TAATAAGAAT GCAGAAAACG TGAAGGAATT TCTGCAATCT TATCAATCAC CCGAAGTCGC TAAAGCGGCA GAAACCATCT TTAACGGTGG TGCGGTGCCT GGCTGGTAA
|
Protein sequence | MKLTTHHLRA GAALLLAGVL LAGCDQSSSD EKHIKVGVIN GAEQDVAEVA KKVAKEKYGL DVELVGFSGS LLPNDATNNG ELDANVFQHR PFLEQDNQTH GYKLVAVGNT FVFPMAGYSK KIKTVAQIKE GATVAIPNDP TNLGRALLLL QKEKLITLKE GKGLLPTALD ITDNPRHLQI MELEGAQLPR VLDDPKVDVA IISTTYIEQT GLSPVNDSVF IEDKNSPYVN ILVAREDNKN AENVKEFLQS YQSPEVAKAA ETIFNGGAVP GW
|
| |