Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4994 |
Symbol | rfaC |
ID | 6969335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4645916 |
End bp | 4646908 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643388675 |
Product | ADP-heptose:LPS heptosyl transferase I |
Protein accession | YP_002273102 |
Protein GI | 209399933 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.041745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTTT TGATCGTTAA AACATCGTCG ATGGGCGATG TTCTCCATAC GTTGCCCGCA CTCACTGATG CCCAGCAGGC AATCCCAGAA ATTAAGTTTG ACTGGGTGGT GGAAGAAGGG TTCGCACAGA TTCCTTCCTG GCACGCTGCC GTTGAGCGAG TTATTCCTGT GGCAATACGT CGCTGGCGTA AAGCCTGGTT CTCGGCCCCT ATAAAAGCTG AACGCAAAGC GTTTCGTGAA GCGCTACAAG CAGAGAACTA TGACGCAGTT ATCGACGCTC AGGGGCTGGT AAAAAGCGCG GCGCTGGTTA CGCGTCTGGC ACATGGCGTA AAGCATGGCA TGGACTGGCA AACCGCTCGC GAACCTTTAG CCAGCCTGTT TTACAATCGT AAGCATCATA TTGCAAAACA GCAGCACGCC GTAGAACGCA CCCGCGAACT GTTTGCCAAA AGTTTGGGCT ATAGCAAACC GCAAACCCAG GGCGATTATG CTATCGCACA GCATTTTCTG ACGAACCTGC CTACAGATGC TGGCGAATAT GCCGTATTTC TTCATGCGAC GACCCGTGAT GATAAACACT GGCCGGAAGA ACACTGGCGA GAATTGATTG GTTTACTGGC TGATTCAGGA ATACGGATTA AACTTCCGTG GGGCGCGCCG CATGAGGAAG AACGGGCGAA ACGACTGGCG GAAGGATTTG CTTATGTTGA AGTATTGCCG AAGATGAGTC TGGAAGGCGT TGCCCGCGTG CTGGCCGGGG CTAAATTTGT AGTGTCGGTG GATACGGGGT TAAGCCATTT AACGGCGGCA CTGGATAGAC CCAATATCAC GGTTTATGGA CCAACCGATC CGGGATTAAT TGGTGGGTAT GGGGAGAATC AAGTAGAGTG TCGTTCTACA AGTATGTCTC TTGCAGATTT GCCAGCTCAA ACCGTTTTTC AAAATTTAAA TCTTGAAATA ATAACCAATA AGTTGACATC GGAGATAAGA TGA
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Protein sequence | MRVLIVKTSS MGDVLHTLPA LTDAQQAIPE IKFDWVVEEG FAQIPSWHAA VERVIPVAIR RWRKAWFSAP IKAERKAFRE ALQAENYDAV IDAQGLVKSA ALVTRLAHGV KHGMDWQTAR EPLASLFYNR KHHIAKQQHA VERTRELFAK SLGYSKPQTQ GDYAIAQHFL TNLPTDAGEY AVFLHATTRD DKHWPEEHWR ELIGLLADSG IRIKLPWGAP HEEERAKRLA EGFAYVEVLP KMSLEGVARV LAGAKFVVSV DTGLSHLTAA LDRPNITVYG PTDPGLIGGY GENQVECRST SMSLADLPAQ TVFQNLNLEI ITNKLTSEIR
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